Gene : Thecc1EG007523 T. cacao v1.1

Defline:  (1 of 1) PTHR12320:SF9 - PROTEIN PHOSPHATASE 2C 62-RELATED Genomic Order:  1361
Name:  ? Thecc1EG007523 Secondary Identifier:  ? PAC:27463831

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG007523 0.5kb upstream 0.5kb upstream 9169 true scaffold_2: 7460079-7469247 Theobroma cacao
Thecc1EG007523 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 7460079-7460578 Theobroma cacao
Thecc1EG007523 0.5kb downstream 0.5kb downstream 9169 true scaffold_2: 7460579-7469747 Theobroma cacao
Thecc1EG007523 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 7469248-7469747 Theobroma cacao
Thecc1EG007523 1.0kb upstream 1.0kb upstream 9669 true scaffold_2: 7459579-7469247 Theobroma cacao
Thecc1EG007523 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 7459579-7460578 Theobroma cacao
Thecc1EG007523 1.0kb downstream 1.0kb downstream 9669 true scaffold_2: 7460579-7470247 Theobroma cacao
Thecc1EG007523 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 7469248-7470247 Theobroma cacao
Thecc1EG007523 2.0kb upstream 2.0kb upstream 10669 true scaffold_2: 7458579-7469247 Theobroma cacao
Thecc1EG007523 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 7458579-7460578 Theobroma cacao
Thecc1EG007523 2.0kb downstream 2.0kb downstream 10669 true scaffold_2: 7460579-7471247 Theobroma cacao
Thecc1EG007523 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 7469248-7471247 Theobroma cacao
Thecc1EG007523 5.0kb upstream 5.0kb upstream 13669 true scaffold_2: 7455579-7469247 Theobroma cacao
Thecc1EG007523 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 7455579-7460578 Theobroma cacao
Thecc1EG007523 5.0kb downstream 5.0kb downstream 13669 true scaffold_2: 7460579-7474247 Theobroma cacao
Thecc1EG007523 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 7469248-7474247 Theobroma cacao
Thecc1EG007523 10.0kb upstream 10.0kb upstream 18669 true scaffold_2: 7450579-7469247 Theobroma cacao
Thecc1EG007523 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 7450579-7460578 Theobroma cacao
Thecc1EG007523 10.0kb downstream 10.0kb downstream 18669 true scaffold_2: 7460579-7479247 Theobroma cacao
Thecc1EG007523 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 7469248-7479247 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123837640 5264 Brassicales-Malvales View MSA
124322341 5266 SBM View MSA
124244510 5268 Malvidae View MSA
124063620 5270 Rosid View MSA
123740753 5271 Pentapetalae View MSA
122796169 5272 Eudicot View MSA
122049301 5273 Angiosperm View MSA
121351334 5274 Embryophyte View MSA
123428574 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain