Gene : Thecc1EG007522 T. cacao v1.1
Defline:  (1 of 1) K08917 - light-harvesting complex II chlorophyll a/b binding protein 6 (LHCB6) Genomic Order:  1360
Name:  ? Thecc1EG007522 Secondary Identifier:  ? PAC:27464256
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG007522 0.5kb upstream 0.5kb upstream 1810 true scaffold_2: 7457465-7459274 Theobroma cacao
Thecc1EG007522 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 7458775-7459274 Theobroma cacao
Thecc1EG007522 0.5kb downstream 0.5kb downstream 1810 true scaffold_2: 7456965-7458774 Theobroma cacao
Thecc1EG007522 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 7456965-7457464 Theobroma cacao
Thecc1EG007522 1.0kb upstream 1.0kb upstream 2310 true scaffold_2: 7457465-7459774 Theobroma cacao
Thecc1EG007522 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 7458775-7459774 Theobroma cacao
Thecc1EG007522 1.0kb downstream 1.0kb downstream 2310 true scaffold_2: 7456465-7458774 Theobroma cacao
Thecc1EG007522 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 7456465-7457464 Theobroma cacao
Thecc1EG007522 2.0kb upstream 2.0kb upstream 3310 true scaffold_2: 7457465-7460774 Theobroma cacao
Thecc1EG007522 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 7458775-7460774 Theobroma cacao
Thecc1EG007522 2.0kb downstream 2.0kb downstream 3310 true scaffold_2: 7455465-7458774 Theobroma cacao
Thecc1EG007522 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 7455465-7457464 Theobroma cacao
Thecc1EG007522 5.0kb upstream 5.0kb upstream 6310 true scaffold_2: 7457465-7463774 Theobroma cacao
Thecc1EG007522 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 7458775-7463774 Theobroma cacao
Thecc1EG007522 5.0kb downstream 5.0kb downstream 6310 true scaffold_2: 7452465-7458774 Theobroma cacao
Thecc1EG007522 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 7452465-7457464 Theobroma cacao
Thecc1EG007522 10.0kb upstream 10.0kb upstream 11310 true scaffold_2: 7457465-7468774 Theobroma cacao
Thecc1EG007522 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 7458775-7468774 Theobroma cacao
Thecc1EG007522 10.0kb downstream 10.0kb downstream 11310 true scaffold_2: 7447465-7458774 Theobroma cacao
Thecc1EG007522 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 7447465-7457464 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123841189 5264 Brassicales-Malvales View MSA
124345557 5266 SBM View MSA
124238758 5268 Malvidae View MSA
124068665 5270 Rosid View MSA
123745282 5271 Pentapetalae View MSA
122788201 5272 Eudicot View MSA
122042531 5273 Angiosperm View MSA
121350849 5274 Embryophyte View MSA
123381903 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain