Gene : Thecc1EG007514 T. cacao v1.1
Defline:  (1 of 7) PTHR31235//PTHR31235:SF27 - FAMILY NOT NAMED // PEROXIDASE 62-RELATED Genomic Order:  1354
Name:  ? Thecc1EG007514 Secondary Identifier:  ? PAC:27461219
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-5466 Theobroma cacao pathologic  
Tcacao PWY-6824 Theobroma cacao pathologic  
Tcacao PWY-7214 Theobroma cacao pathologic  
Tcacao PWY-7445 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG007514 0.5kb upstream 0.5kb upstream 2176 true scaffold_2: 7417040-7419215 Theobroma cacao
Thecc1EG007514 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 7418716-7419215 Theobroma cacao
Thecc1EG007514 0.5kb downstream 0.5kb downstream 2176 true scaffold_2: 7416540-7418715 Theobroma cacao
Thecc1EG007514 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 7416540-7417039 Theobroma cacao
Thecc1EG007514 1.0kb upstream 1.0kb upstream 2676 true scaffold_2: 7417040-7419715 Theobroma cacao
Thecc1EG007514 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 7418716-7419715 Theobroma cacao
Thecc1EG007514 1.0kb downstream 1.0kb downstream 2676 true scaffold_2: 7416040-7418715 Theobroma cacao
Thecc1EG007514 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 7416040-7417039 Theobroma cacao
Thecc1EG007514 2.0kb upstream 2.0kb upstream 3676 true scaffold_2: 7417040-7420715 Theobroma cacao
Thecc1EG007514 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 7418716-7420715 Theobroma cacao
Thecc1EG007514 2.0kb downstream 2.0kb downstream 3676 true scaffold_2: 7415040-7418715 Theobroma cacao
Thecc1EG007514 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 7415040-7417039 Theobroma cacao
Thecc1EG007514 5.0kb upstream 5.0kb upstream 6676 true scaffold_2: 7417040-7423715 Theobroma cacao
Thecc1EG007514 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 7418716-7423715 Theobroma cacao
Thecc1EG007514 5.0kb downstream 5.0kb downstream 6676 true scaffold_2: 7412040-7418715 Theobroma cacao
Thecc1EG007514 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 7412040-7417039 Theobroma cacao
Thecc1EG007514 10.0kb upstream 10.0kb upstream 11676 true scaffold_2: 7417040-7428715 Theobroma cacao
Thecc1EG007514 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 7418716-7428715 Theobroma cacao
Thecc1EG007514 10.0kb downstream 10.0kb downstream 11676 true scaffold_2: 7407040-7418715 Theobroma cacao
Thecc1EG007514 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 7407040-7417039 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123836413 5264 Brassicales-Malvales View MSA
124342166 5266 SBM View MSA
124248571 5268 Malvidae View MSA
124066864 5270 Rosid View MSA
123752607 5271 Pentapetalae View MSA
122796741 5272 Eudicot View MSA
122051577 5273 Angiosperm View MSA
121351674 5274 Embryophyte View MSA
123426672 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain