Gene : Thecc1EG007484 T. cacao v1.1
Defline:  (1 of 1) PTHR24093:SF124 - COPPER-TRANSPORTING ATPASE PAA1, CHLOROPLASTIC Genomic Order:  1329
Name:  ? Thecc1EG007484 Secondary Identifier:  ? PAC:27463955
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG007484 0.5kb upstream 0.5kb upstream 14492 true scaffold_2: 7252996-7267487 Theobroma cacao
Thecc1EG007484 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 7266988-7267487 Theobroma cacao
Thecc1EG007484 0.5kb downstream 0.5kb downstream 14492 true scaffold_2: 7252496-7266987 Theobroma cacao
Thecc1EG007484 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 7252496-7252995 Theobroma cacao
Thecc1EG007484 1.0kb upstream 1.0kb upstream 14992 true scaffold_2: 7252996-7267987 Theobroma cacao
Thecc1EG007484 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 7266988-7267987 Theobroma cacao
Thecc1EG007484 1.0kb downstream 1.0kb downstream 14992 true scaffold_2: 7251996-7266987 Theobroma cacao
Thecc1EG007484 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 7251996-7252995 Theobroma cacao
Thecc1EG007484 2.0kb upstream 2.0kb upstream 15992 true scaffold_2: 7252996-7268987 Theobroma cacao
Thecc1EG007484 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 7266988-7268987 Theobroma cacao
Thecc1EG007484 2.0kb downstream 2.0kb downstream 15992 true scaffold_2: 7250996-7266987 Theobroma cacao
Thecc1EG007484 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 7250996-7252995 Theobroma cacao
Thecc1EG007484 5.0kb upstream 5.0kb upstream 18992 true scaffold_2: 7252996-7271987 Theobroma cacao
Thecc1EG007484 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 7266988-7271987 Theobroma cacao
Thecc1EG007484 5.0kb downstream 5.0kb downstream 18992 true scaffold_2: 7247996-7266987 Theobroma cacao
Thecc1EG007484 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 7247996-7252995 Theobroma cacao
Thecc1EG007484 10.0kb upstream 10.0kb upstream 23992 true scaffold_2: 7252996-7276987 Theobroma cacao
Thecc1EG007484 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 7266988-7276987 Theobroma cacao
Thecc1EG007484 10.0kb downstream 10.0kb downstream 23992 true scaffold_2: 7242996-7266987 Theobroma cacao
Thecc1EG007484 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 7242996-7252995 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123836384 5264 Brassicales-Malvales View MSA
124322156 5266 SBM View MSA
124254253 5268 Malvidae View MSA
124074915 5270 Rosid View MSA
123753356 5271 Pentapetalae View MSA
122796910 5272 Eudicot View MSA
122047959 5273 Angiosperm View MSA
121350289 5274 Embryophyte View MSA
123427971 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain