Gene : Thecc1EG007483 T. cacao v1.1
Defline:  (1 of 1) PTHR31803//PTHR31803:SF6 - FAMILY NOT NAMED // UBIQUINOL OXIDASE 2, MITOCHONDRIAL Genomic Order:  1328
Name:  ? Thecc1EG007483 Secondary Identifier:  ? PAC:27464784
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-4302 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG007483 0.5kb upstream 0.5kb upstream 4112 true scaffold_2: 7248996-7253107 Theobroma cacao
Thecc1EG007483 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 7248996-7249495 Theobroma cacao
Thecc1EG007483 0.5kb downstream 0.5kb downstream 4112 true scaffold_2: 7249496-7253607 Theobroma cacao
Thecc1EG007483 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 7253108-7253607 Theobroma cacao
Thecc1EG007483 1.0kb upstream 1.0kb upstream 4612 true scaffold_2: 7248496-7253107 Theobroma cacao
Thecc1EG007483 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 7248496-7249495 Theobroma cacao
Thecc1EG007483 1.0kb downstream 1.0kb downstream 4612 true scaffold_2: 7249496-7254107 Theobroma cacao
Thecc1EG007483 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 7253108-7254107 Theobroma cacao
Thecc1EG007483 2.0kb upstream 2.0kb upstream 5612 true scaffold_2: 7247496-7253107 Theobroma cacao
Thecc1EG007483 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 7247496-7249495 Theobroma cacao
Thecc1EG007483 2.0kb downstream 2.0kb downstream 5612 true scaffold_2: 7249496-7255107 Theobroma cacao
Thecc1EG007483 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 7253108-7255107 Theobroma cacao
Thecc1EG007483 5.0kb upstream 5.0kb upstream 8612 true scaffold_2: 7244496-7253107 Theobroma cacao
Thecc1EG007483 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 7244496-7249495 Theobroma cacao
Thecc1EG007483 5.0kb downstream 5.0kb downstream 8612 true scaffold_2: 7249496-7258107 Theobroma cacao
Thecc1EG007483 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 7253108-7258107 Theobroma cacao
Thecc1EG007483 10.0kb upstream 10.0kb upstream 13612 true scaffold_2: 7239496-7253107 Theobroma cacao
Thecc1EG007483 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 7239496-7249495 Theobroma cacao
Thecc1EG007483 10.0kb downstream 10.0kb downstream 13612 true scaffold_2: 7249496-7263107 Theobroma cacao
Thecc1EG007483 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 7253108-7263107 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123836828 5264 Brassicales-Malvales View MSA
124346827 5266 SBM View MSA
124246674 5268 Malvidae View MSA
124071385 5270 Rosid View MSA
123743047 5271 Pentapetalae View MSA
122794845 5272 Eudicot View MSA
122048992 5273 Angiosperm View MSA
121347153 5274 Embryophyte View MSA
123426662 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain