Gene : Thecc1EG007463 T. cacao v1.1
Defline:  (1 of 3) PF00656//PF06943 - Caspase domain (Peptidase_C14) // LSD1 zinc finger (zf-LSD1) Genomic Order:  1306
Name:  ? Thecc1EG007463 Secondary Identifier:  ? PAC:27463534
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG007463 0.5kb upstream 0.5kb upstream 79868 true scaffold_2: 7060846-7140713 Theobroma cacao
Thecc1EG007463 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 7060846-7061345 Theobroma cacao
Thecc1EG007463 0.5kb downstream 0.5kb downstream 79868 true scaffold_2: 7061346-7141213 Theobroma cacao
Thecc1EG007463 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 7140714-7141213 Theobroma cacao
Thecc1EG007463 1.0kb upstream 1.0kb upstream 80368 true scaffold_2: 7060346-7140713 Theobroma cacao
Thecc1EG007463 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 7060346-7061345 Theobroma cacao
Thecc1EG007463 1.0kb downstream 1.0kb downstream 80368 true scaffold_2: 7061346-7141713 Theobroma cacao
Thecc1EG007463 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 7140714-7141713 Theobroma cacao
Thecc1EG007463 2.0kb upstream 2.0kb upstream 81368 true scaffold_2: 7059346-7140713 Theobroma cacao
Thecc1EG007463 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 7059346-7061345 Theobroma cacao
Thecc1EG007463 2.0kb downstream 2.0kb downstream 81368 true scaffold_2: 7061346-7142713 Theobroma cacao
Thecc1EG007463 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 7140714-7142713 Theobroma cacao
Thecc1EG007463 5.0kb upstream 5.0kb upstream 84368 true scaffold_2: 7056346-7140713 Theobroma cacao
Thecc1EG007463 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 7056346-7061345 Theobroma cacao
Thecc1EG007463 5.0kb downstream 5.0kb downstream 84368 true scaffold_2: 7061346-7145713 Theobroma cacao
Thecc1EG007463 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 7140714-7145713 Theobroma cacao
Thecc1EG007463 10.0kb upstream 10.0kb upstream 89368 true scaffold_2: 7051346-7140713 Theobroma cacao
Thecc1EG007463 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 7051346-7061345 Theobroma cacao
Thecc1EG007463 10.0kb downstream 10.0kb downstream 89368 true scaffold_2: 7061346-7150713 Theobroma cacao
Thecc1EG007463 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 7140714-7150713 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123834783 5264 Brassicales-Malvales View MSA
124344945 5266 SBM View MSA
124253694 5268 Malvidae View MSA
124037273 5270 Rosid View MSA
123744103 5271 Pentapetalae View MSA
122795793 5272 Eudicot View MSA
122050099 5273 Angiosperm View MSA
123428899 5275 Viridiplantae View MSA
121348125 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain