Gene : Thecc1EG007409 T. cacao v1.1
Defline:  (1 of 4) PTHR10209//PTHR10209:SF167 - OXIDOREDUCTASE, 2OG-FE II OXYGENASE FAMILY PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  1273
Name:  ? Thecc1EG007409 Secondary Identifier:  ? PAC:27459928
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY1F-823 Theobroma cacao pathologic  
Tcacao PWY1F-FLAVSYN Theobroma cacao pathologic  
Tcacao PWY-5059 Theobroma cacao pathologic  
Tcacao PWY-5152 Theobroma cacao pathologic  
Tcacao PWY-6787 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG007409 0.5kb upstream 0.5kb upstream 2673 true scaffold_2: 6807647-6810319 Theobroma cacao
Thecc1EG007409 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 6809820-6810319 Theobroma cacao
Thecc1EG007409 0.5kb downstream 0.5kb downstream 2673 true scaffold_2: 6807147-6809819 Theobroma cacao
Thecc1EG007409 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 6807147-6807646 Theobroma cacao
Thecc1EG007409 1.0kb upstream 1.0kb upstream 3173 true scaffold_2: 6807647-6810819 Theobroma cacao
Thecc1EG007409 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 6809820-6810819 Theobroma cacao
Thecc1EG007409 1.0kb downstream 1.0kb downstream 3173 true scaffold_2: 6806647-6809819 Theobroma cacao
Thecc1EG007409 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 6806647-6807646 Theobroma cacao
Thecc1EG007409 2.0kb upstream 2.0kb upstream 4173 true scaffold_2: 6807647-6811819 Theobroma cacao
Thecc1EG007409 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 6809820-6811819 Theobroma cacao
Thecc1EG007409 2.0kb downstream 2.0kb downstream 4173 true scaffold_2: 6805647-6809819 Theobroma cacao
Thecc1EG007409 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 6805647-6807646 Theobroma cacao
Thecc1EG007409 5.0kb upstream 5.0kb upstream 7173 true scaffold_2: 6807647-6814819 Theobroma cacao
Thecc1EG007409 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 6809820-6814819 Theobroma cacao
Thecc1EG007409 5.0kb downstream 5.0kb downstream 7173 true scaffold_2: 6802647-6809819 Theobroma cacao
Thecc1EG007409 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 6802647-6807646 Theobroma cacao
Thecc1EG007409 10.0kb upstream 10.0kb upstream 12173 true scaffold_2: 6807647-6819819 Theobroma cacao
Thecc1EG007409 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 6809820-6819819 Theobroma cacao
Thecc1EG007409 10.0kb downstream 10.0kb downstream 12173 true scaffold_2: 6797647-6809819 Theobroma cacao
Thecc1EG007409 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 6797647-6807646 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123824443 5264 Brassicales-Malvales View MSA
124347237 5266 SBM View MSA
124245385 5268 Malvidae View MSA
124074703 5270 Rosid View MSA
123753505 5271 Pentapetalae View MSA
122796711 5272 Eudicot View MSA
122051611 5273 Angiosperm View MSA
123429101 5275 Viridiplantae View MSA
121351374 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain