Gene : Thecc1EG007660 T. cacao v1.1
Defline:  (1 of 1) PF14214//PF16900 - Helitron helicase-like domain at N-terminus (Helitron_like_N) // Replication protein A OB domain (REPA_OB_2) Genomic Order:  1473
Name:  ? Thecc1EG007660 Secondary Identifier:  ? PAC:27464834
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG007660 0.5kb upstream 0.5kb upstream 14974 true scaffold_2: 8182629-8197602 Theobroma cacao
Thecc1EG007660 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 8197103-8197602 Theobroma cacao
Thecc1EG007660 0.5kb downstream 0.5kb downstream 14974 true scaffold_2: 8182129-8197102 Theobroma cacao
Thecc1EG007660 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 8182129-8182628 Theobroma cacao
Thecc1EG007660 1.0kb upstream 1.0kb upstream 15474 true scaffold_2: 8182629-8198102 Theobroma cacao
Thecc1EG007660 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 8197103-8198102 Theobroma cacao
Thecc1EG007660 1.0kb downstream 1.0kb downstream 15474 true scaffold_2: 8181629-8197102 Theobroma cacao
Thecc1EG007660 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 8181629-8182628 Theobroma cacao
Thecc1EG007660 2.0kb upstream 2.0kb upstream 16474 true scaffold_2: 8182629-8199102 Theobroma cacao
Thecc1EG007660 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 8197103-8199102 Theobroma cacao
Thecc1EG007660 2.0kb downstream 2.0kb downstream 16474 true scaffold_2: 8180629-8197102 Theobroma cacao
Thecc1EG007660 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 8180629-8182628 Theobroma cacao
Thecc1EG007660 5.0kb upstream 5.0kb upstream 19474 true scaffold_2: 8182629-8202102 Theobroma cacao
Thecc1EG007660 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 8197103-8202102 Theobroma cacao
Thecc1EG007660 5.0kb downstream 5.0kb downstream 19474 true scaffold_2: 8177629-8197102 Theobroma cacao
Thecc1EG007660 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 8177629-8182628 Theobroma cacao
Thecc1EG007660 10.0kb upstream 10.0kb upstream 24474 true scaffold_2: 8182629-8207102 Theobroma cacao
Thecc1EG007660 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 8197103-8207102 Theobroma cacao
Thecc1EG007660 10.0kb downstream 10.0kb downstream 24474 true scaffold_2: 8172629-8197102 Theobroma cacao
Thecc1EG007660 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 8172629-8182628 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121520527 5273 Angiosperm Singleton cluster - no MSA
123817854 5264 Brassicales-Malvales Singleton cluster - no MSA
124314191 5266 SBM Singleton cluster - no MSA
124163209 5268 Malvidae Singleton cluster - no MSA
123887069 5270 Rosid Singleton cluster - no MSA
123469566 5271 Pentapetalae Singleton cluster - no MSA
122504861 5272 Eudicot Singleton cluster - no MSA
121351580 5274 Embryophyte View MSA
123426292 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain