Gene : Thecc1EG007646 T. cacao v1.1
Defline:  (1 of 1) PTHR10949//PTHR10949:SF12 - LIPOYL SYNTHASE // LIPOYL SYNTHASE, CHLOROPLASTIC Genomic Order:  1460
Name:  ? Thecc1EG007646 Secondary Identifier:  ? PAC:27465033
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY0-501 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG007646 0.5kb upstream 0.5kb upstream 5276 true scaffold_2: 8067910-8073185 Theobroma cacao
Thecc1EG007646 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 8072686-8073185 Theobroma cacao
Thecc1EG007646 0.5kb downstream 0.5kb downstream 5276 true scaffold_2: 8067410-8072685 Theobroma cacao
Thecc1EG007646 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 8067410-8067909 Theobroma cacao
Thecc1EG007646 1.0kb upstream 1.0kb upstream 5776 true scaffold_2: 8067910-8073685 Theobroma cacao
Thecc1EG007646 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 8072686-8073685 Theobroma cacao
Thecc1EG007646 1.0kb downstream 1.0kb downstream 5776 true scaffold_2: 8066910-8072685 Theobroma cacao
Thecc1EG007646 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 8066910-8067909 Theobroma cacao
Thecc1EG007646 2.0kb upstream 2.0kb upstream 6776 true scaffold_2: 8067910-8074685 Theobroma cacao
Thecc1EG007646 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 8072686-8074685 Theobroma cacao
Thecc1EG007646 2.0kb downstream 2.0kb downstream 6776 true scaffold_2: 8065910-8072685 Theobroma cacao
Thecc1EG007646 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 8065910-8067909 Theobroma cacao
Thecc1EG007646 5.0kb upstream 5.0kb upstream 9776 true scaffold_2: 8067910-8077685 Theobroma cacao
Thecc1EG007646 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 8072686-8077685 Theobroma cacao
Thecc1EG007646 5.0kb downstream 5.0kb downstream 9776 true scaffold_2: 8062910-8072685 Theobroma cacao
Thecc1EG007646 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 8062910-8067909 Theobroma cacao
Thecc1EG007646 10.0kb upstream 10.0kb upstream 14776 true scaffold_2: 8067910-8082685 Theobroma cacao
Thecc1EG007646 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 8072686-8082685 Theobroma cacao
Thecc1EG007646 10.0kb downstream 10.0kb downstream 14776 true scaffold_2: 8057910-8072685 Theobroma cacao
Thecc1EG007646 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 8057910-8067909 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041417 5273 Angiosperm View MSA
123840832 5264 Brassicales-Malvales View MSA
124338504 5266 SBM View MSA
124239973 5268 Malvidae View MSA
124063598 5270 Rosid View MSA
123745953 5271 Pentapetalae View MSA
122793471 5272 Eudicot View MSA
121346374 5274 Embryophyte View MSA
123424868 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain