Gene : Thecc1EG007630 T. cacao v1.1
Defline:  (1 of 1) PTHR19845//PTHR19845:SF0 - KATANIN P80 SUBUNIT // KATANIN P80 WD40 REPEAT-CONTAINING SUBUNIT B1 Genomic Order:  1449
Name:  ? Thecc1EG007630 Secondary Identifier:  ? PAC:27462777
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG007630 0.5kb upstream 0.5kb upstream 20495 true scaffold_2: 7988093-8008587 Theobroma cacao
Thecc1EG007630 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 8008088-8008587 Theobroma cacao
Thecc1EG007630 0.5kb downstream 0.5kb downstream 20495 true scaffold_2: 7987593-8008087 Theobroma cacao
Thecc1EG007630 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 7987593-7988092 Theobroma cacao
Thecc1EG007630 1.0kb upstream 1.0kb upstream 20995 true scaffold_2: 7988093-8009087 Theobroma cacao
Thecc1EG007630 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 8008088-8009087 Theobroma cacao
Thecc1EG007630 1.0kb downstream 1.0kb downstream 20995 true scaffold_2: 7987093-8008087 Theobroma cacao
Thecc1EG007630 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 7987093-7988092 Theobroma cacao
Thecc1EG007630 2.0kb upstream 2.0kb upstream 21995 true scaffold_2: 7988093-8010087 Theobroma cacao
Thecc1EG007630 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 8008088-8010087 Theobroma cacao
Thecc1EG007630 2.0kb downstream 2.0kb downstream 21995 true scaffold_2: 7986093-8008087 Theobroma cacao
Thecc1EG007630 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 7986093-7988092 Theobroma cacao
Thecc1EG007630 5.0kb upstream 5.0kb upstream 24995 true scaffold_2: 7988093-8013087 Theobroma cacao
Thecc1EG007630 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 8008088-8013087 Theobroma cacao
Thecc1EG007630 5.0kb downstream 5.0kb downstream 24995 true scaffold_2: 7983093-8008087 Theobroma cacao
Thecc1EG007630 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 7983093-7988092 Theobroma cacao
Thecc1EG007630 10.0kb upstream 10.0kb upstream 29995 true scaffold_2: 7988093-8018087 Theobroma cacao
Thecc1EG007630 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 8008088-8018087 Theobroma cacao
Thecc1EG007630 10.0kb downstream 10.0kb downstream 29995 true scaffold_2: 7978093-8008087 Theobroma cacao
Thecc1EG007630 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 7978093-7988092 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123837633 5264 Brassicales-Malvales View MSA
124350797 5266 SBM View MSA
124240803 5268 Malvidae View MSA
124070795 5270 Rosid View MSA
123750232 5271 Pentapetalae View MSA
122791817 5272 Eudicot View MSA
122044503 5273 Angiosperm View MSA
121345721 5274 Embryophyte View MSA
123425332 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain