Gene : Thecc1EG007622 T. cacao v1.1
Defline:  (1 of 1) PTHR11689:SF14 - CHLORIDE CHANNEL PROTEIN 2 Genomic Order:  1442
Name:  ? Thecc1EG007622 Secondary Identifier:  ? PAC:27462299
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG007622 0.5kb upstream 0.5kb upstream 5435 true scaffold_2: 7951731-7957165 Theobroma cacao
Thecc1EG007622 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 7956666-7957165 Theobroma cacao
Thecc1EG007622 0.5kb downstream 0.5kb downstream 5435 true scaffold_2: 7951231-7956665 Theobroma cacao
Thecc1EG007622 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 7951231-7951730 Theobroma cacao
Thecc1EG007622 1.0kb upstream 1.0kb upstream 5935 true scaffold_2: 7951731-7957665 Theobroma cacao
Thecc1EG007622 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 7956666-7957665 Theobroma cacao
Thecc1EG007622 1.0kb downstream 1.0kb downstream 5935 true scaffold_2: 7950731-7956665 Theobroma cacao
Thecc1EG007622 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 7950731-7951730 Theobroma cacao
Thecc1EG007622 2.0kb upstream 2.0kb upstream 6935 true scaffold_2: 7951731-7958665 Theobroma cacao
Thecc1EG007622 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 7956666-7958665 Theobroma cacao
Thecc1EG007622 2.0kb downstream 2.0kb downstream 6935 true scaffold_2: 7949731-7956665 Theobroma cacao
Thecc1EG007622 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 7949731-7951730 Theobroma cacao
Thecc1EG007622 5.0kb upstream 5.0kb upstream 9935 true scaffold_2: 7951731-7961665 Theobroma cacao
Thecc1EG007622 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 7956666-7961665 Theobroma cacao
Thecc1EG007622 5.0kb downstream 5.0kb downstream 9935 true scaffold_2: 7946731-7956665 Theobroma cacao
Thecc1EG007622 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 7946731-7951730 Theobroma cacao
Thecc1EG007622 10.0kb upstream 10.0kb upstream 14935 true scaffold_2: 7951731-7966665 Theobroma cacao
Thecc1EG007622 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 7956666-7966665 Theobroma cacao
Thecc1EG007622 10.0kb downstream 10.0kb downstream 14935 true scaffold_2: 7941731-7956665 Theobroma cacao
Thecc1EG007622 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 7941731-7951730 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123827881 5264 Brassicales-Malvales View MSA
124342078 5266 SBM View MSA
124252989 5268 Malvidae View MSA
124064511 5270 Rosid View MSA
123748133 5271 Pentapetalae View MSA
122793511 5272 Eudicot View MSA
122047702 5273 Angiosperm View MSA
121347705 5274 Embryophyte View MSA
123427001 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain