Gene : Thecc1EG007610 T. cacao v1.1

Defline:  (1 of 1) PTHR31669:SF14 - PROTEIN FAR1-RELATED SEQUENCE 9 Genomic Order:  1431
Name:  ? Thecc1EG007610 Secondary Identifier:  ? PAC:27459715

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG007610 0.5kb upstream 0.5kb upstream 5225 true scaffold_2: 7890817-7896041 Theobroma cacao
Thecc1EG007610 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 7895542-7896041 Theobroma cacao
Thecc1EG007610 0.5kb downstream 0.5kb downstream 5225 true scaffold_2: 7890317-7895541 Theobroma cacao
Thecc1EG007610 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 7890317-7890816 Theobroma cacao
Thecc1EG007610 1.0kb upstream 1.0kb upstream 5725 true scaffold_2: 7890817-7896541 Theobroma cacao
Thecc1EG007610 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 7895542-7896541 Theobroma cacao
Thecc1EG007610 1.0kb downstream 1.0kb downstream 5725 true scaffold_2: 7889817-7895541 Theobroma cacao
Thecc1EG007610 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 7889817-7890816 Theobroma cacao
Thecc1EG007610 2.0kb upstream 2.0kb upstream 6725 true scaffold_2: 7890817-7897541 Theobroma cacao
Thecc1EG007610 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 7895542-7897541 Theobroma cacao
Thecc1EG007610 2.0kb downstream 2.0kb downstream 6725 true scaffold_2: 7888817-7895541 Theobroma cacao
Thecc1EG007610 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 7888817-7890816 Theobroma cacao
Thecc1EG007610 5.0kb upstream 5.0kb upstream 9725 true scaffold_2: 7890817-7900541 Theobroma cacao
Thecc1EG007610 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 7895542-7900541 Theobroma cacao
Thecc1EG007610 5.0kb downstream 5.0kb downstream 9725 true scaffold_2: 7885817-7895541 Theobroma cacao
Thecc1EG007610 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 7885817-7890816 Theobroma cacao
Thecc1EG007610 10.0kb upstream 10.0kb upstream 14725 true scaffold_2: 7890817-7905541 Theobroma cacao
Thecc1EG007610 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 7895542-7905541 Theobroma cacao
Thecc1EG007610 10.0kb downstream 10.0kb downstream 14725 true scaffold_2: 7880817-7895541 Theobroma cacao
Thecc1EG007610 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 7880817-7890816 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123833067 5264 Brassicales-Malvales View MSA
124321841 5266 SBM View MSA
124241419 5268 Malvidae View MSA
124065498 5270 Rosid View MSA
123752178 5271 Pentapetalae View MSA
122796628 5272 Eudicot View MSA
122051679 5273 Angiosperm View MSA
121351767 5274 Embryophyte View MSA
123382313 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain