Gene : Thecc1EG007599 T. cacao v1.1
Defline:  (1 of 2) K01885 - glutamyl-tRNA synthetase (EARS, gltX) Genomic Order:  1423
Name:  ? Thecc1EG007599 Secondary Identifier:  ? PAC:27460276
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-5188 Theobroma cacao pathologic  
Tcacao PWY-5918 Theobroma cacao pathologic  
Tcacao TRNA-CHARGING-PWY Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG007599 0.5kb upstream 0.5kb upstream 6541 true scaffold_2: 7825623-7832163 Theobroma cacao
Thecc1EG007599 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 7825623-7826122 Theobroma cacao
Thecc1EG007599 0.5kb downstream 0.5kb downstream 6541 true scaffold_2: 7826123-7832663 Theobroma cacao
Thecc1EG007599 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 7832164-7832663 Theobroma cacao
Thecc1EG007599 1.0kb upstream 1.0kb upstream 7041 true scaffold_2: 7825123-7832163 Theobroma cacao
Thecc1EG007599 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 7825123-7826122 Theobroma cacao
Thecc1EG007599 1.0kb downstream 1.0kb downstream 7041 true scaffold_2: 7826123-7833163 Theobroma cacao
Thecc1EG007599 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 7832164-7833163 Theobroma cacao
Thecc1EG007599 2.0kb upstream 2.0kb upstream 8041 true scaffold_2: 7824123-7832163 Theobroma cacao
Thecc1EG007599 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 7824123-7826122 Theobroma cacao
Thecc1EG007599 2.0kb downstream 2.0kb downstream 8041 true scaffold_2: 7826123-7834163 Theobroma cacao
Thecc1EG007599 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 7832164-7834163 Theobroma cacao
Thecc1EG007599 5.0kb upstream 5.0kb upstream 11041 true scaffold_2: 7821123-7832163 Theobroma cacao
Thecc1EG007599 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 7821123-7826122 Theobroma cacao
Thecc1EG007599 5.0kb downstream 5.0kb downstream 11041 true scaffold_2: 7826123-7837163 Theobroma cacao
Thecc1EG007599 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 7832164-7837163 Theobroma cacao
Thecc1EG007599 10.0kb upstream 10.0kb upstream 16041 true scaffold_2: 7816123-7832163 Theobroma cacao
Thecc1EG007599 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 7816123-7826122 Theobroma cacao
Thecc1EG007599 10.0kb downstream 10.0kb downstream 16041 true scaffold_2: 7826123-7842163 Theobroma cacao
Thecc1EG007599 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 7832164-7842163 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123832530 5264 Brassicales-Malvales View MSA
124344288 5266 SBM View MSA
124238938 5268 Malvidae View MSA
124063360 5270 Rosid View MSA
123737264 5271 Pentapetalae View MSA
122787973 5272 Eudicot View MSA
122041760 5273 Angiosperm View MSA
121345245 5274 Embryophyte View MSA
123424323 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain