Gene : Thecc1EG007777 T. cacao v1.1
Defline:  (1 of 3) PTHR23042//PTHR23042:SF67 - CIRCADIAN PROTEIN CLOCK/ARNT/BMAL/PAS // TRANSCRIPTION FACTOR ILR3-RELATED Genomic Order:  1573
Name:  ? Thecc1EG007777 Secondary Identifier:  ? PAC:27464604
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG007777 0.5kb upstream 0.5kb upstream 2515 true scaffold_2: 8886269-8888783 Theobroma cacao
Thecc1EG007777 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 8888284-8888783 Theobroma cacao
Thecc1EG007777 0.5kb downstream 0.5kb downstream 2515 true scaffold_2: 8885769-8888283 Theobroma cacao
Thecc1EG007777 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 8885769-8886268 Theobroma cacao
Thecc1EG007777 1.0kb upstream 1.0kb upstream 3015 true scaffold_2: 8886269-8889283 Theobroma cacao
Thecc1EG007777 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 8888284-8889283 Theobroma cacao
Thecc1EG007777 1.0kb downstream 1.0kb downstream 3015 true scaffold_2: 8885269-8888283 Theobroma cacao
Thecc1EG007777 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 8885269-8886268 Theobroma cacao
Thecc1EG007777 2.0kb upstream 2.0kb upstream 4015 true scaffold_2: 8886269-8890283 Theobroma cacao
Thecc1EG007777 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 8888284-8890283 Theobroma cacao
Thecc1EG007777 2.0kb downstream 2.0kb downstream 4015 true scaffold_2: 8884269-8888283 Theobroma cacao
Thecc1EG007777 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 8884269-8886268 Theobroma cacao
Thecc1EG007777 5.0kb upstream 5.0kb upstream 7015 true scaffold_2: 8886269-8893283 Theobroma cacao
Thecc1EG007777 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 8888284-8893283 Theobroma cacao
Thecc1EG007777 5.0kb downstream 5.0kb downstream 7015 true scaffold_2: 8881269-8888283 Theobroma cacao
Thecc1EG007777 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 8881269-8886268 Theobroma cacao
Thecc1EG007777 10.0kb upstream 10.0kb upstream 12015 true scaffold_2: 8886269-8898283 Theobroma cacao
Thecc1EG007777 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 8888284-8898283 Theobroma cacao
Thecc1EG007777 10.0kb downstream 10.0kb downstream 12015 true scaffold_2: 8876269-8888283 Theobroma cacao
Thecc1EG007777 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 8876269-8886268 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123826952 5264 Brassicales-Malvales View MSA
124347263 5266 SBM View MSA
124180936 5268 Malvidae View MSA
124074180 5270 Rosid View MSA
123746573 5271 Pentapetalae View MSA
122797303 5272 Eudicot View MSA
122049965 5273 Angiosperm View MSA
121349797 5274 Embryophyte View MSA
123427389 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain