Gene : Thecc1EG007763 T. cacao v1.1

Defline:  (1 of 1) PTHR11527//PTHR11527:SF131 - SMALL HEAT-SHOCK PROTEIN HSP20 FAMILY // SUBFAMILY NOT NAMED Genomic Order:  1565
Name:  ? Thecc1EG007763 Secondary Identifier:  ? PAC:27461854

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG007763 0.5kb upstream 0.5kb upstream 2268 true scaffold_2: 8809519-8811786 Theobroma cacao
Thecc1EG007763 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 8809519-8810018 Theobroma cacao
Thecc1EG007763 0.5kb downstream 0.5kb downstream 2268 true scaffold_2: 8810019-8812286 Theobroma cacao
Thecc1EG007763 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 8811787-8812286 Theobroma cacao
Thecc1EG007763 1.0kb upstream 1.0kb upstream 2768 true scaffold_2: 8809019-8811786 Theobroma cacao
Thecc1EG007763 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 8809019-8810018 Theobroma cacao
Thecc1EG007763 1.0kb downstream 1.0kb downstream 2768 true scaffold_2: 8810019-8812786 Theobroma cacao
Thecc1EG007763 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 8811787-8812786 Theobroma cacao
Thecc1EG007763 2.0kb upstream 2.0kb upstream 3768 true scaffold_2: 8808019-8811786 Theobroma cacao
Thecc1EG007763 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 8808019-8810018 Theobroma cacao
Thecc1EG007763 2.0kb downstream 2.0kb downstream 3768 true scaffold_2: 8810019-8813786 Theobroma cacao
Thecc1EG007763 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 8811787-8813786 Theobroma cacao
Thecc1EG007763 5.0kb upstream 5.0kb upstream 6768 true scaffold_2: 8805019-8811786 Theobroma cacao
Thecc1EG007763 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 8805019-8810018 Theobroma cacao
Thecc1EG007763 5.0kb downstream 5.0kb downstream 6768 true scaffold_2: 8810019-8816786 Theobroma cacao
Thecc1EG007763 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 8811787-8816786 Theobroma cacao
Thecc1EG007763 10.0kb upstream 10.0kb upstream 11768 true scaffold_2: 8800019-8811786 Theobroma cacao
Thecc1EG007763 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 8800019-8810018 Theobroma cacao
Thecc1EG007763 10.0kb downstream 10.0kb downstream 11768 true scaffold_2: 8810019-8821786 Theobroma cacao
Thecc1EG007763 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 8811787-8821786 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123840868 5264 Brassicales-Malvales View MSA
124344040 5266 SBM View MSA
124238801 5268 Malvidae View MSA
124074314 5270 Rosid View MSA
123751884 5271 Pentapetalae View MSA
122795343 5272 Eudicot View MSA
122051065 5273 Angiosperm View MSA
121312276 5274 Embryophyte View MSA
123428296 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain