Gene : Thecc1EG007750 T. cacao v1.1
Defline:  (1 of 2) 2.5.1.39 - 4-hydroxybenzoate polyprenyltransferase / 4-hydroxybenzoate nonaprenyltransferase Genomic Order:  1556
Name:  ? Thecc1EG007750 Secondary Identifier:  ? PAC:27459764
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-5871 Theobroma cacao pathologic  
Tcacao PWY-5872 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG007750 0.5kb upstream 0.5kb upstream 4096 true scaffold_2: 8730805-8734900 Theobroma cacao
Thecc1EG007750 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 8734401-8734900 Theobroma cacao
Thecc1EG007750 0.5kb downstream 0.5kb downstream 4096 true scaffold_2: 8730305-8734400 Theobroma cacao
Thecc1EG007750 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 8730305-8730804 Theobroma cacao
Thecc1EG007750 1.0kb upstream 1.0kb upstream 4596 true scaffold_2: 8730805-8735400 Theobroma cacao
Thecc1EG007750 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 8734401-8735400 Theobroma cacao
Thecc1EG007750 1.0kb downstream 1.0kb downstream 4596 true scaffold_2: 8729805-8734400 Theobroma cacao
Thecc1EG007750 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 8729805-8730804 Theobroma cacao
Thecc1EG007750 2.0kb upstream 2.0kb upstream 5596 true scaffold_2: 8730805-8736400 Theobroma cacao
Thecc1EG007750 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 8734401-8736400 Theobroma cacao
Thecc1EG007750 2.0kb downstream 2.0kb downstream 5596 true scaffold_2: 8728805-8734400 Theobroma cacao
Thecc1EG007750 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 8728805-8730804 Theobroma cacao
Thecc1EG007750 5.0kb upstream 5.0kb upstream 8596 true scaffold_2: 8730805-8739400 Theobroma cacao
Thecc1EG007750 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 8734401-8739400 Theobroma cacao
Thecc1EG007750 5.0kb downstream 5.0kb downstream 8596 true scaffold_2: 8725805-8734400 Theobroma cacao
Thecc1EG007750 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 8725805-8730804 Theobroma cacao
Thecc1EG007750 10.0kb upstream 10.0kb upstream 13596 true scaffold_2: 8730805-8744400 Theobroma cacao
Thecc1EG007750 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 8734401-8744400 Theobroma cacao
Thecc1EG007750 10.0kb downstream 10.0kb downstream 13596 true scaffold_2: 8720805-8734400 Theobroma cacao
Thecc1EG007750 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 8720805-8730804 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123828873 5264 Brassicales-Malvales View MSA
124338665 5266 SBM View MSA
124252362 5268 Malvidae View MSA
124066892 5270 Rosid View MSA
123737843 5271 Pentapetalae View MSA
122788354 5272 Eudicot View MSA
122042592 5273 Angiosperm View MSA
121344514 5274 Embryophyte View MSA
123428392 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain