Gene : Thecc1EG007743 T. cacao v1.1
Defline:  (1 of 4) K01915 - glutamine synthetase (glnA, GLUL) Genomic Order:  1549
Name:  ? Thecc1EG007743 Secondary Identifier:  ? PAC:27460180
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Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao GLNSYN-PWY Theobroma cacao pathologic  
Tcacao PWY-3282 Theobroma cacao pathologic  
Tcacao PWY-381 Theobroma cacao pathologic  
Tcacao PWY-6549 Theobroma cacao pathologic  
Tcacao PWY-6963 Theobroma cacao pathologic  
Tcacao PWY-6964 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG007743 0.5kb upstream 0.5kb upstream 7365 true scaffold_2: 8672893-8680257 Theobroma cacao
Thecc1EG007743 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 8672893-8673392 Theobroma cacao
Thecc1EG007743 0.5kb downstream 0.5kb downstream 7365 true scaffold_2: 8673393-8680757 Theobroma cacao
Thecc1EG007743 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 8680258-8680757 Theobroma cacao
Thecc1EG007743 1.0kb upstream 1.0kb upstream 7865 true scaffold_2: 8672393-8680257 Theobroma cacao
Thecc1EG007743 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 8672393-8673392 Theobroma cacao
Thecc1EG007743 1.0kb downstream 1.0kb downstream 7865 true scaffold_2: 8673393-8681257 Theobroma cacao
Thecc1EG007743 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 8680258-8681257 Theobroma cacao
Thecc1EG007743 2.0kb upstream 2.0kb upstream 8865 true scaffold_2: 8671393-8680257 Theobroma cacao
Thecc1EG007743 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 8671393-8673392 Theobroma cacao
Thecc1EG007743 2.0kb downstream 2.0kb downstream 8865 true scaffold_2: 8673393-8682257 Theobroma cacao
Thecc1EG007743 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 8680258-8682257 Theobroma cacao
Thecc1EG007743 5.0kb upstream 5.0kb upstream 11865 true scaffold_2: 8668393-8680257 Theobroma cacao
Thecc1EG007743 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 8668393-8673392 Theobroma cacao
Thecc1EG007743 5.0kb downstream 5.0kb downstream 11865 true scaffold_2: 8673393-8685257 Theobroma cacao
Thecc1EG007743 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 8680258-8685257 Theobroma cacao
Thecc1EG007743 10.0kb upstream 10.0kb upstream 16865 true scaffold_2: 8663393-8680257 Theobroma cacao
Thecc1EG007743 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 8663393-8673392 Theobroma cacao
Thecc1EG007743 10.0kb downstream 10.0kb downstream 16865 true scaffold_2: 8673393-8690257 Theobroma cacao
Thecc1EG007743 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 8680258-8690257 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123841665 5264 Brassicales-Malvales View MSA
124350836 5266 SBM View MSA
124245417 5268 Malvidae View MSA
124072083 5270 Rosid View MSA
123746903 5271 Pentapetalae View MSA
122794697 5272 Eudicot View MSA
122048815 5273 Angiosperm View MSA
121347129 5274 Embryophyte View MSA
123428761 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain