Gene : Thecc1EG007709 T. cacao v1.1
Defline:  (1 of 45) PF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) Genomic Order:  1517
Name:  ? Thecc1EG007709 Secondary Identifier:  ? PAC:27462125
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Ontology Annotation Displayer

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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG007709 0.5kb upstream 0.5kb upstream 12992 true scaffold_2: 8471838-8484829 Theobroma cacao
Thecc1EG007709 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 8471838-8472337 Theobroma cacao
Thecc1EG007709 0.5kb downstream 0.5kb downstream 12992 true scaffold_2: 8472338-8485329 Theobroma cacao
Thecc1EG007709 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 8484830-8485329 Theobroma cacao
Thecc1EG007709 1.0kb upstream 1.0kb upstream 13492 true scaffold_2: 8471338-8484829 Theobroma cacao
Thecc1EG007709 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 8471338-8472337 Theobroma cacao
Thecc1EG007709 1.0kb downstream 1.0kb downstream 13492 true scaffold_2: 8472338-8485829 Theobroma cacao
Thecc1EG007709 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 8484830-8485829 Theobroma cacao
Thecc1EG007709 2.0kb upstream 2.0kb upstream 14492 true scaffold_2: 8470338-8484829 Theobroma cacao
Thecc1EG007709 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 8470338-8472337 Theobroma cacao
Thecc1EG007709 2.0kb downstream 2.0kb downstream 14492 true scaffold_2: 8472338-8486829 Theobroma cacao
Thecc1EG007709 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 8484830-8486829 Theobroma cacao
Thecc1EG007709 5.0kb upstream 5.0kb upstream 17492 true scaffold_2: 8467338-8484829 Theobroma cacao
Thecc1EG007709 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 8467338-8472337 Theobroma cacao
Thecc1EG007709 5.0kb downstream 5.0kb downstream 17492 true scaffold_2: 8472338-8489829 Theobroma cacao
Thecc1EG007709 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 8484830-8489829 Theobroma cacao
Thecc1EG007709 10.0kb upstream 10.0kb upstream 22492 true scaffold_2: 8462338-8484829 Theobroma cacao
Thecc1EG007709 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 8462338-8472337 Theobroma cacao
Thecc1EG007709 10.0kb downstream 10.0kb downstream 22492 true scaffold_2: 8472338-8494829 Theobroma cacao
Thecc1EG007709 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 8484830-8494829 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123833252 5264 Brassicales-Malvales View MSA
124339215 5266 SBM View MSA
124241904 5268 Malvidae View MSA
124063102 5270 Rosid View MSA
123740388 5271 Pentapetalae View MSA
122790856 5272 Eudicot View MSA
122046765 5273 Angiosperm View MSA
121310656 5274 Embryophyte View MSA
123348085 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain