Gene : Thecc1EG007713 T. cacao v1.1
Defline:  (1 of 2) PTHR11945:SF242 - PROTEIN TRANSPARENT TESTA 16 Genomic Order:  1520
Name:  ? Thecc1EG007713 Secondary Identifier:  ? PAC:27463323
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG007713 0.5kb upstream 0.5kb upstream 4320 true scaffold_2: 8497126-8501445 Theobroma cacao
Thecc1EG007713 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 8500946-8501445 Theobroma cacao
Thecc1EG007713 0.5kb downstream 0.5kb downstream 4320 true scaffold_2: 8496626-8500945 Theobroma cacao
Thecc1EG007713 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 8496626-8497125 Theobroma cacao
Thecc1EG007713 1.0kb upstream 1.0kb upstream 4820 true scaffold_2: 8497126-8501945 Theobroma cacao
Thecc1EG007713 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 8500946-8501945 Theobroma cacao
Thecc1EG007713 1.0kb downstream 1.0kb downstream 4820 true scaffold_2: 8496126-8500945 Theobroma cacao
Thecc1EG007713 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 8496126-8497125 Theobroma cacao
Thecc1EG007713 2.0kb upstream 2.0kb upstream 5820 true scaffold_2: 8497126-8502945 Theobroma cacao
Thecc1EG007713 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 8500946-8502945 Theobroma cacao
Thecc1EG007713 2.0kb downstream 2.0kb downstream 5820 true scaffold_2: 8495126-8500945 Theobroma cacao
Thecc1EG007713 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 8495126-8497125 Theobroma cacao
Thecc1EG007713 5.0kb upstream 5.0kb upstream 8820 true scaffold_2: 8497126-8505945 Theobroma cacao
Thecc1EG007713 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 8500946-8505945 Theobroma cacao
Thecc1EG007713 5.0kb downstream 5.0kb downstream 8820 true scaffold_2: 8492126-8500945 Theobroma cacao
Thecc1EG007713 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 8492126-8497125 Theobroma cacao
Thecc1EG007713 10.0kb upstream 10.0kb upstream 13820 true scaffold_2: 8497126-8510945 Theobroma cacao
Thecc1EG007713 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 8500946-8510945 Theobroma cacao
Thecc1EG007713 10.0kb downstream 10.0kb downstream 13820 true scaffold_2: 8487126-8500945 Theobroma cacao
Thecc1EG007713 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 8487126-8497125 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123834072 5264 Brassicales-Malvales View MSA
124340883 5266 SBM View MSA
124239237 5268 Malvidae View MSA
124062898 5270 Rosid View MSA
123748976 5271 Pentapetalae View MSA
122793472 5272 Eudicot View MSA
122046677 5273 Angiosperm View MSA
121350957 5274 Embryophyte View MSA
123424057 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain