Gene : Thecc1EG008141 T. cacao v1.1

Defline:  (1 of 27) PF08263//PF13855 - Leucine rich repeat N-terminal domain (LRRNT_2) // Leucine rich repeat (LRR_8) Genomic Order:  1773
Name:  ? Thecc1EG008141 Secondary Identifier:  ? PAC:27460087

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG008141 0.5kb upstream 0.5kb upstream 2355 true scaffold_2: 11401423-11403777 Theobroma cacao
Thecc1EG008141 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 11403278-11403777 Theobroma cacao
Thecc1EG008141 0.5kb downstream 0.5kb downstream 2355 true scaffold_2: 11400923-11403277 Theobroma cacao
Thecc1EG008141 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 11400923-11401422 Theobroma cacao
Thecc1EG008141 1.0kb upstream 1.0kb upstream 2855 true scaffold_2: 11401423-11404277 Theobroma cacao
Thecc1EG008141 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 11403278-11404277 Theobroma cacao
Thecc1EG008141 1.0kb downstream 1.0kb downstream 2855 true scaffold_2: 11400423-11403277 Theobroma cacao
Thecc1EG008141 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 11400423-11401422 Theobroma cacao
Thecc1EG008141 2.0kb upstream 2.0kb upstream 3855 true scaffold_2: 11401423-11405277 Theobroma cacao
Thecc1EG008141 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 11403278-11405277 Theobroma cacao
Thecc1EG008141 2.0kb downstream 2.0kb downstream 3855 true scaffold_2: 11399423-11403277 Theobroma cacao
Thecc1EG008141 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 11399423-11401422 Theobroma cacao
Thecc1EG008141 5.0kb upstream 5.0kb upstream 6855 true scaffold_2: 11401423-11408277 Theobroma cacao
Thecc1EG008141 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 11403278-11408277 Theobroma cacao
Thecc1EG008141 5.0kb downstream 5.0kb downstream 6855 true scaffold_2: 11396423-11403277 Theobroma cacao
Thecc1EG008141 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 11396423-11401422 Theobroma cacao
Thecc1EG008141 10.0kb upstream 10.0kb upstream 11855 true scaffold_2: 11401423-11413277 Theobroma cacao
Thecc1EG008141 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 11403278-11413277 Theobroma cacao
Thecc1EG008141 10.0kb downstream 10.0kb downstream 11855 true scaffold_2: 11391423-11403277 Theobroma cacao
Thecc1EG008141 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 11391423-11401422 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123828849 5264 Brassicales-Malvales View MSA
124345745 5266 SBM View MSA
124239773 5268 Malvidae View MSA
124060445 5270 Rosid View MSA
123737371 5271 Pentapetalae View MSA
122793115 5272 Eudicot View MSA
122048760 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121349764 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain