Gene : Thecc1EG008105 T. cacao v1.1
Defline:  (1 of 1) PTHR31805//PTHR31805:SF3 - FAMILY NOT NAMED // PROLINE-RICH PROTEIN-RELATED Genomic Order:  1746
Name:  ? Thecc1EG008105 Secondary Identifier:  ? PAC:27464527
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG008105 0.5kb upstream 0.5kb upstream 5037 true scaffold_2: 11124657-11129693 Theobroma cacao
Thecc1EG008105 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 11124657-11125156 Theobroma cacao
Thecc1EG008105 0.5kb downstream 0.5kb downstream 5037 true scaffold_2: 11125157-11130193 Theobroma cacao
Thecc1EG008105 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 11129694-11130193 Theobroma cacao
Thecc1EG008105 1.0kb upstream 1.0kb upstream 5537 true scaffold_2: 11124157-11129693 Theobroma cacao
Thecc1EG008105 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 11124157-11125156 Theobroma cacao
Thecc1EG008105 1.0kb downstream 1.0kb downstream 5537 true scaffold_2: 11125157-11130693 Theobroma cacao
Thecc1EG008105 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 11129694-11130693 Theobroma cacao
Thecc1EG008105 2.0kb upstream 2.0kb upstream 6537 true scaffold_2: 11123157-11129693 Theobroma cacao
Thecc1EG008105 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 11123157-11125156 Theobroma cacao
Thecc1EG008105 2.0kb downstream 2.0kb downstream 6537 true scaffold_2: 11125157-11131693 Theobroma cacao
Thecc1EG008105 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 11129694-11131693 Theobroma cacao
Thecc1EG008105 5.0kb upstream 5.0kb upstream 9537 true scaffold_2: 11120157-11129693 Theobroma cacao
Thecc1EG008105 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 11120157-11125156 Theobroma cacao
Thecc1EG008105 5.0kb downstream 5.0kb downstream 9537 true scaffold_2: 11125157-11134693 Theobroma cacao
Thecc1EG008105 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 11129694-11134693 Theobroma cacao
Thecc1EG008105 10.0kb upstream 10.0kb upstream 14537 true scaffold_2: 11115157-11129693 Theobroma cacao
Thecc1EG008105 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 11115157-11125156 Theobroma cacao
Thecc1EG008105 10.0kb downstream 10.0kb downstream 14537 true scaffold_2: 11125157-11139693 Theobroma cacao
Thecc1EG008105 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 11129694-11139693 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123834013 5264 Brassicales-Malvales View MSA
124346014 5266 SBM View MSA
124238313 5268 Malvidae View MSA
124071409 5270 Rosid View MSA
123740794 5271 Pentapetalae View MSA
122789592 5272 Eudicot View MSA
122050948 5273 Angiosperm View MSA
121350556 5274 Embryophyte View MSA
123427524 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain