Gene : Thecc1EG007985 T. cacao v1.1
Defline:  (1 of 1) PTHR10949:SF0 - LIPOYL SYNTHASE, MITOCHONDRIAL Genomic Order:  1694
Name:  ? Thecc1EG007985 Secondary Identifier:  ? PAC:27465023
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY0-501 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG007985 0.5kb upstream 0.5kb upstream 3596 true scaffold_2: 10300052-10303647 Theobroma cacao
Thecc1EG007985 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 10300052-10300551 Theobroma cacao
Thecc1EG007985 0.5kb downstream 0.5kb downstream 3596 true scaffold_2: 10300552-10304147 Theobroma cacao
Thecc1EG007985 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 10303648-10304147 Theobroma cacao
Thecc1EG007985 1.0kb upstream 1.0kb upstream 4096 true scaffold_2: 10299552-10303647 Theobroma cacao
Thecc1EG007985 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 10299552-10300551 Theobroma cacao
Thecc1EG007985 1.0kb downstream 1.0kb downstream 4096 true scaffold_2: 10300552-10304647 Theobroma cacao
Thecc1EG007985 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 10303648-10304647 Theobroma cacao
Thecc1EG007985 2.0kb upstream 2.0kb upstream 5096 true scaffold_2: 10298552-10303647 Theobroma cacao
Thecc1EG007985 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 10298552-10300551 Theobroma cacao
Thecc1EG007985 2.0kb downstream 2.0kb downstream 5096 true scaffold_2: 10300552-10305647 Theobroma cacao
Thecc1EG007985 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 10303648-10305647 Theobroma cacao
Thecc1EG007985 5.0kb upstream 5.0kb upstream 8096 true scaffold_2: 10295552-10303647 Theobroma cacao
Thecc1EG007985 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 10295552-10300551 Theobroma cacao
Thecc1EG007985 5.0kb downstream 5.0kb downstream 8096 true scaffold_2: 10300552-10308647 Theobroma cacao
Thecc1EG007985 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 10303648-10308647 Theobroma cacao
Thecc1EG007985 10.0kb upstream 10.0kb upstream 13096 true scaffold_2: 10290552-10303647 Theobroma cacao
Thecc1EG007985 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 10290552-10300551 Theobroma cacao
Thecc1EG007985 10.0kb downstream 10.0kb downstream 13096 true scaffold_2: 10300552-10313647 Theobroma cacao
Thecc1EG007985 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 10303648-10313647 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123828206 5264 Brassicales-Malvales View MSA
124340008 5266 SBM View MSA
124241256 5268 Malvidae View MSA
124060481 5270 Rosid View MSA
123740164 5271 Pentapetalae View MSA
122788424 5272 Eudicot View MSA
122045804 5273 Angiosperm View MSA
121345971 5274 Embryophyte View MSA
123424868 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain