Gene : Thecc1EG007954 T. cacao v1.1
Defline:  Embryo defective 1923 (61%P) Genomic Order:  1673
Name:  ? Thecc1EG007954 Secondary Identifier:  ? PAC:27462430
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG007954 0.5kb upstream 0.5kb upstream 3011 true scaffold_2: 10141312-10144322 Theobroma cacao
Thecc1EG007954 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 10143823-10144322 Theobroma cacao
Thecc1EG007954 0.5kb downstream 0.5kb downstream 3011 true scaffold_2: 10140812-10143822 Theobroma cacao
Thecc1EG007954 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 10140812-10141311 Theobroma cacao
Thecc1EG007954 1.0kb upstream 1.0kb upstream 3511 true scaffold_2: 10141312-10144822 Theobroma cacao
Thecc1EG007954 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 10143823-10144822 Theobroma cacao
Thecc1EG007954 1.0kb downstream 1.0kb downstream 3511 true scaffold_2: 10140312-10143822 Theobroma cacao
Thecc1EG007954 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 10140312-10141311 Theobroma cacao
Thecc1EG007954 2.0kb upstream 2.0kb upstream 4511 true scaffold_2: 10141312-10145822 Theobroma cacao
Thecc1EG007954 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 10143823-10145822 Theobroma cacao
Thecc1EG007954 2.0kb downstream 2.0kb downstream 4511 true scaffold_2: 10139312-10143822 Theobroma cacao
Thecc1EG007954 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 10139312-10141311 Theobroma cacao
Thecc1EG007954 5.0kb upstream 5.0kb upstream 7511 true scaffold_2: 10141312-10148822 Theobroma cacao
Thecc1EG007954 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 10143823-10148822 Theobroma cacao
Thecc1EG007954 5.0kb downstream 5.0kb downstream 7511 true scaffold_2: 10136312-10143822 Theobroma cacao
Thecc1EG007954 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 10136312-10141311 Theobroma cacao
Thecc1EG007954 10.0kb upstream 10.0kb upstream 12511 true scaffold_2: 10141312-10153822 Theobroma cacao
Thecc1EG007954 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 10143823-10153822 Theobroma cacao
Thecc1EG007954 10.0kb downstream 10.0kb downstream 12511 true scaffold_2: 10131312-10143822 Theobroma cacao
Thecc1EG007954 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 10131312-10141311 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123829953 5264 Brassicales-Malvales View MSA
124340628 5266 SBM View MSA
124238061 5268 Malvidae View MSA
124061138 5270 Rosid View MSA
123738834 5271 Pentapetalae View MSA
122792895 5272 Eudicot View MSA
122049851 5273 Angiosperm View MSA
121345117 5274 Embryophyte View MSA
123380161 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain