Gene : Thecc1EG007964 T. cacao v1.1
Defline:  (1 of 2) 2.1.2.5//6.3.3.2 - Glutamate formimidoyltransferase / Glutamate formyltransferase // 5-formyltetrahydrofolate cyclo-ligase / Methenyl-THF synthetase Genomic Order:  1681
Name:  ? Thecc1EG007964 Secondary Identifier:  ? PAC:27460065
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-3841 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG007964 0.5kb upstream 0.5kb upstream 3512 true scaffold_2: 10183578-10187089 Theobroma cacao
Thecc1EG007964 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 10183578-10184077 Theobroma cacao
Thecc1EG007964 0.5kb downstream 0.5kb downstream 3512 true scaffold_2: 10184078-10187589 Theobroma cacao
Thecc1EG007964 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 10187090-10187589 Theobroma cacao
Thecc1EG007964 1.0kb upstream 1.0kb upstream 4012 true scaffold_2: 10183078-10187089 Theobroma cacao
Thecc1EG007964 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 10183078-10184077 Theobroma cacao
Thecc1EG007964 1.0kb downstream 1.0kb downstream 4012 true scaffold_2: 10184078-10188089 Theobroma cacao
Thecc1EG007964 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 10187090-10188089 Theobroma cacao
Thecc1EG007964 2.0kb upstream 2.0kb upstream 5012 true scaffold_2: 10182078-10187089 Theobroma cacao
Thecc1EG007964 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 10182078-10184077 Theobroma cacao
Thecc1EG007964 2.0kb downstream 2.0kb downstream 5012 true scaffold_2: 10184078-10189089 Theobroma cacao
Thecc1EG007964 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 10187090-10189089 Theobroma cacao
Thecc1EG007964 5.0kb upstream 5.0kb upstream 8012 true scaffold_2: 10179078-10187089 Theobroma cacao
Thecc1EG007964 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 10179078-10184077 Theobroma cacao
Thecc1EG007964 5.0kb downstream 5.0kb downstream 8012 true scaffold_2: 10184078-10192089 Theobroma cacao
Thecc1EG007964 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 10187090-10192089 Theobroma cacao
Thecc1EG007964 10.0kb upstream 10.0kb upstream 13012 true scaffold_2: 10174078-10187089 Theobroma cacao
Thecc1EG007964 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 10174078-10184077 Theobroma cacao
Thecc1EG007964 10.0kb downstream 10.0kb downstream 13012 true scaffold_2: 10184078-10197089 Theobroma cacao
Thecc1EG007964 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 10187090-10197089 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123838386 5264 Brassicales-Malvales View MSA
124347024 5266 SBM View MSA
124247002 5268 Malvidae View MSA
124070892 5270 Rosid View MSA
123745948 5271 Pentapetalae View MSA
122795317 5272 Eudicot View MSA
122048049 5273 Angiosperm View MSA
121344000 5274 Embryophyte View MSA
123424939 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain