Gene : Thecc1EG007966 T. cacao v1.1
Defline:  (1 of 1) PTHR12234//PTHR12234:SF3 - FORMIMINOTRANSFERASE-CYCLODEAMINASE // SUBFAMILY NOT NAMED Genomic Order:  1682
Name:  ? Thecc1EG007966 Secondary Identifier:  ? PAC:27464572
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-3841 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG007966 0.5kb upstream 0.5kb upstream 3935 true scaffold_2: 10187611-10191545 Theobroma cacao
Thecc1EG007966 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 10187611-10188110 Theobroma cacao
Thecc1EG007966 0.5kb downstream 0.5kb downstream 3935 true scaffold_2: 10188111-10192045 Theobroma cacao
Thecc1EG007966 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 10191546-10192045 Theobroma cacao
Thecc1EG007966 1.0kb upstream 1.0kb upstream 4435 true scaffold_2: 10187111-10191545 Theobroma cacao
Thecc1EG007966 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 10187111-10188110 Theobroma cacao
Thecc1EG007966 1.0kb downstream 1.0kb downstream 4435 true scaffold_2: 10188111-10192545 Theobroma cacao
Thecc1EG007966 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 10191546-10192545 Theobroma cacao
Thecc1EG007966 2.0kb upstream 2.0kb upstream 5435 true scaffold_2: 10186111-10191545 Theobroma cacao
Thecc1EG007966 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 10186111-10188110 Theobroma cacao
Thecc1EG007966 2.0kb downstream 2.0kb downstream 5435 true scaffold_2: 10188111-10193545 Theobroma cacao
Thecc1EG007966 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 10191546-10193545 Theobroma cacao
Thecc1EG007966 5.0kb upstream 5.0kb upstream 8435 true scaffold_2: 10183111-10191545 Theobroma cacao
Thecc1EG007966 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 10183111-10188110 Theobroma cacao
Thecc1EG007966 5.0kb downstream 5.0kb downstream 8435 true scaffold_2: 10188111-10196545 Theobroma cacao
Thecc1EG007966 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 10191546-10196545 Theobroma cacao
Thecc1EG007966 10.0kb upstream 10.0kb upstream 13435 true scaffold_2: 10178111-10191545 Theobroma cacao
Thecc1EG007966 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 10178111-10188110 Theobroma cacao
Thecc1EG007966 10.0kb downstream 10.0kb downstream 13435 true scaffold_2: 10188111-10201545 Theobroma cacao
Thecc1EG007966 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 10191546-10201545 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123817813 5264 Brassicales-Malvales Singleton cluster - no MSA
124348280 5266 SBM View MSA
124247002 5268 Malvidae View MSA
124070892 5270 Rosid View MSA
123745948 5271 Pentapetalae View MSA
122795317 5272 Eudicot View MSA
122048049 5273 Angiosperm View MSA
121344000 5274 Embryophyte View MSA
123424939 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain