Gene : Thecc1EG007906 T. cacao v1.1
Defline:  (1 of 8) PTHR31625:SF2 - COUMAROYL-COA:ANTHOCYANIDIN 3-O-GLUCOSIDE-6''-O-COUMAROYLTRANSFERASE 1-RELATED Genomic Order:  1641
Name:  ? Thecc1EG007906 Secondary Identifier:  ? PAC:27459963
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG007906 0.5kb upstream 0.5kb upstream 2234 true scaffold_2: 9864492-9866725 Theobroma cacao
Thecc1EG007906 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 9866226-9866725 Theobroma cacao
Thecc1EG007906 0.5kb downstream 0.5kb downstream 2234 true scaffold_2: 9863992-9866225 Theobroma cacao
Thecc1EG007906 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 9863992-9864491 Theobroma cacao
Thecc1EG007906 1.0kb upstream 1.0kb upstream 2734 true scaffold_2: 9864492-9867225 Theobroma cacao
Thecc1EG007906 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 9866226-9867225 Theobroma cacao
Thecc1EG007906 1.0kb downstream 1.0kb downstream 2734 true scaffold_2: 9863492-9866225 Theobroma cacao
Thecc1EG007906 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 9863492-9864491 Theobroma cacao
Thecc1EG007906 2.0kb upstream 2.0kb upstream 3734 true scaffold_2: 9864492-9868225 Theobroma cacao
Thecc1EG007906 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 9866226-9868225 Theobroma cacao
Thecc1EG007906 2.0kb downstream 2.0kb downstream 3734 true scaffold_2: 9862492-9866225 Theobroma cacao
Thecc1EG007906 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 9862492-9864491 Theobroma cacao
Thecc1EG007906 5.0kb upstream 5.0kb upstream 6734 true scaffold_2: 9864492-9871225 Theobroma cacao
Thecc1EG007906 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 9866226-9871225 Theobroma cacao
Thecc1EG007906 5.0kb downstream 5.0kb downstream 6734 true scaffold_2: 9859492-9866225 Theobroma cacao
Thecc1EG007906 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 9859492-9864491 Theobroma cacao
Thecc1EG007906 10.0kb upstream 10.0kb upstream 11734 true scaffold_2: 9864492-9876225 Theobroma cacao
Thecc1EG007906 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 9866226-9876225 Theobroma cacao
Thecc1EG007906 10.0kb downstream 10.0kb downstream 11734 true scaffold_2: 9854492-9866225 Theobroma cacao
Thecc1EG007906 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 9854492-9864491 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123816933 5264 Brassicales-Malvales Singleton cluster - no MSA
124351830 5266 SBM View MSA
124248659 5268 Malvidae View MSA
124073771 5270 Rosid View MSA
123753544 5271 Pentapetalae View MSA
122797119 5272 Eudicot View MSA
122051643 5273 Angiosperm View MSA
121350983 5274 Embryophyte View MSA
123428782 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain