Gene : Thecc1EG007920 T. cacao v1.1
Defline:  (1 of 8) PTHR31625:SF2 - COUMAROYL-COA:ANTHOCYANIDIN 3-O-GLUCOSIDE-6''-O-COUMAROYLTRANSFERASE 1-RELATED Genomic Order:  1649
Name:  ? Thecc1EG007920 Secondary Identifier:  ? PAC:27463371
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG007920 0.5kb upstream 0.5kb upstream 3262 true scaffold_2: 9959733-9962994 Theobroma cacao
Thecc1EG007920 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 9959733-9960232 Theobroma cacao
Thecc1EG007920 0.5kb downstream 0.5kb downstream 3262 true scaffold_2: 9960233-9963494 Theobroma cacao
Thecc1EG007920 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 9962995-9963494 Theobroma cacao
Thecc1EG007920 1.0kb upstream 1.0kb upstream 3762 true scaffold_2: 9959233-9962994 Theobroma cacao
Thecc1EG007920 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 9959233-9960232 Theobroma cacao
Thecc1EG007920 1.0kb downstream 1.0kb downstream 3762 true scaffold_2: 9960233-9963994 Theobroma cacao
Thecc1EG007920 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 9962995-9963994 Theobroma cacao
Thecc1EG007920 2.0kb upstream 2.0kb upstream 4762 true scaffold_2: 9958233-9962994 Theobroma cacao
Thecc1EG007920 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 9958233-9960232 Theobroma cacao
Thecc1EG007920 2.0kb downstream 2.0kb downstream 4762 true scaffold_2: 9960233-9964994 Theobroma cacao
Thecc1EG007920 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 9962995-9964994 Theobroma cacao
Thecc1EG007920 5.0kb upstream 5.0kb upstream 7762 true scaffold_2: 9955233-9962994 Theobroma cacao
Thecc1EG007920 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 9955233-9960232 Theobroma cacao
Thecc1EG007920 5.0kb downstream 5.0kb downstream 7762 true scaffold_2: 9960233-9967994 Theobroma cacao
Thecc1EG007920 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 9962995-9967994 Theobroma cacao
Thecc1EG007920 10.0kb upstream 10.0kb upstream 12762 true scaffold_2: 9950233-9962994 Theobroma cacao
Thecc1EG007920 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 9950233-9960232 Theobroma cacao
Thecc1EG007920 10.0kb downstream 10.0kb downstream 12762 true scaffold_2: 9960233-9972994 Theobroma cacao
Thecc1EG007920 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 9962995-9972994 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123835730 5264 Brassicales-Malvales View MSA
124347108 5266 SBM View MSA
124248659 5268 Malvidae View MSA
124073771 5270 Rosid View MSA
123753544 5271 Pentapetalae View MSA
122797119 5272 Eudicot View MSA
122051643 5273 Angiosperm View MSA
121350983 5274 Embryophyte View MSA
123428782 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain