Gene : Thecc1EG008353 T. cacao v1.1

Defline:  (1 of 3) K12489 - Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein (ACAP) Genomic Order:  1883
Name:  ? Thecc1EG008353 Secondary Identifier:  ? PAC:27464194

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG008353 0.5kb upstream 0.5kb upstream 10473 true scaffold_2: 12875695-12886167 Theobroma cacao
Thecc1EG008353 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 12875695-12876194 Theobroma cacao
Thecc1EG008353 0.5kb downstream 0.5kb downstream 10473 true scaffold_2: 12876195-12886667 Theobroma cacao
Thecc1EG008353 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 12886168-12886667 Theobroma cacao
Thecc1EG008353 1.0kb upstream 1.0kb upstream 10973 true scaffold_2: 12875195-12886167 Theobroma cacao
Thecc1EG008353 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 12875195-12876194 Theobroma cacao
Thecc1EG008353 1.0kb downstream 1.0kb downstream 10973 true scaffold_2: 12876195-12887167 Theobroma cacao
Thecc1EG008353 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 12886168-12887167 Theobroma cacao
Thecc1EG008353 2.0kb upstream 2.0kb upstream 11973 true scaffold_2: 12874195-12886167 Theobroma cacao
Thecc1EG008353 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 12874195-12876194 Theobroma cacao
Thecc1EG008353 2.0kb downstream 2.0kb downstream 11973 true scaffold_2: 12876195-12888167 Theobroma cacao
Thecc1EG008353 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 12886168-12888167 Theobroma cacao
Thecc1EG008353 5.0kb upstream 5.0kb upstream 14973 true scaffold_2: 12871195-12886167 Theobroma cacao
Thecc1EG008353 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 12871195-12876194 Theobroma cacao
Thecc1EG008353 5.0kb downstream 5.0kb downstream 14973 true scaffold_2: 12876195-12891167 Theobroma cacao
Thecc1EG008353 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 12886168-12891167 Theobroma cacao
Thecc1EG008353 10.0kb upstream 10.0kb upstream 19973 true scaffold_2: 12866195-12886167 Theobroma cacao
Thecc1EG008353 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 12866195-12876194 Theobroma cacao
Thecc1EG008353 10.0kb downstream 10.0kb downstream 19973 true scaffold_2: 12876195-12896167 Theobroma cacao
Thecc1EG008353 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 12886168-12896167 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123833902 5264 Brassicales-Malvales View MSA
124341864 5266 SBM View MSA
124247380 5268 Malvidae View MSA
124066460 5270 Rosid View MSA
123753226 5271 Pentapetalae View MSA
122787909 5272 Eudicot View MSA
122045585 5273 Angiosperm View MSA
121349656 5274 Embryophyte View MSA
123428285 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain