Gene : Thecc1EG008351 T. cacao v1.1
Defline:  (1 of 2) PTHR13445:SF3 - PROTEIN TSSC4 Genomic Order:  1882
Name:  ? Thecc1EG008351 Secondary Identifier:  ? PAC:27461164
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG008351 0.5kb upstream 0.5kb upstream 3231 true scaffold_2: 12863391-12866621 Theobroma cacao
Thecc1EG008351 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 12866122-12866621 Theobroma cacao
Thecc1EG008351 0.5kb downstream 0.5kb downstream 3231 true scaffold_2: 12862891-12866121 Theobroma cacao
Thecc1EG008351 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 12862891-12863390 Theobroma cacao
Thecc1EG008351 1.0kb upstream 1.0kb upstream 3731 true scaffold_2: 12863391-12867121 Theobroma cacao
Thecc1EG008351 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 12866122-12867121 Theobroma cacao
Thecc1EG008351 1.0kb downstream 1.0kb downstream 3731 true scaffold_2: 12862391-12866121 Theobroma cacao
Thecc1EG008351 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 12862391-12863390 Theobroma cacao
Thecc1EG008351 2.0kb upstream 2.0kb upstream 4731 true scaffold_2: 12863391-12868121 Theobroma cacao
Thecc1EG008351 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 12866122-12868121 Theobroma cacao
Thecc1EG008351 2.0kb downstream 2.0kb downstream 4731 true scaffold_2: 12861391-12866121 Theobroma cacao
Thecc1EG008351 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 12861391-12863390 Theobroma cacao
Thecc1EG008351 5.0kb upstream 5.0kb upstream 7731 true scaffold_2: 12863391-12871121 Theobroma cacao
Thecc1EG008351 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 12866122-12871121 Theobroma cacao
Thecc1EG008351 5.0kb downstream 5.0kb downstream 7731 true scaffold_2: 12858391-12866121 Theobroma cacao
Thecc1EG008351 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 12858391-12863390 Theobroma cacao
Thecc1EG008351 10.0kb upstream 10.0kb upstream 12731 true scaffold_2: 12863391-12876121 Theobroma cacao
Thecc1EG008351 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 12866122-12876121 Theobroma cacao
Thecc1EG008351 10.0kb downstream 10.0kb downstream 12731 true scaffold_2: 12853391-12866121 Theobroma cacao
Thecc1EG008351 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 12853391-12863390 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041303 5273 Angiosperm View MSA
123833322 5264 Brassicales-Malvales View MSA
124342915 5266 SBM View MSA
124238822 5268 Malvidae View MSA
124072722 5270 Rosid View MSA
123741101 5271 Pentapetalae View MSA
122794619 5272 Eudicot View MSA
121348542 5274 Embryophyte View MSA
123426495 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain