Gene : Thecc1EG008258 T. cacao v1.1
Defline:  (1 of 1) PTHR10909:SF11 - ACYL-COENZYME A OXIDASE-LIKE PROTEIN Genomic Order:  1834
Name:  ? Thecc1EG008258 Secondary Identifier:  ? PAC:27461295
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Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-5136 Theobroma cacao pathologic  
Tcacao PWY-561 Theobroma cacao pathologic  
Tcacao PWY-6837 Theobroma cacao pathologic  
Tcacao PWY-735 Theobroma cacao pathologic  
Tcacao PWY-7606 Theobroma cacao pathologic  
Tcacao PWY-7726 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG008258 0.5kb upstream 0.5kb upstream 8691 true scaffold_2: 12174856-12183546 Theobroma cacao
Thecc1EG008258 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 12183047-12183546 Theobroma cacao
Thecc1EG008258 0.5kb downstream 0.5kb downstream 8691 true scaffold_2: 12174356-12183046 Theobroma cacao
Thecc1EG008258 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 12174356-12174855 Theobroma cacao
Thecc1EG008258 1.0kb upstream 1.0kb upstream 9191 true scaffold_2: 12174856-12184046 Theobroma cacao
Thecc1EG008258 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 12183047-12184046 Theobroma cacao
Thecc1EG008258 1.0kb downstream 1.0kb downstream 9191 true scaffold_2: 12173856-12183046 Theobroma cacao
Thecc1EG008258 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 12173856-12174855 Theobroma cacao
Thecc1EG008258 2.0kb upstream 2.0kb upstream 10191 true scaffold_2: 12174856-12185046 Theobroma cacao
Thecc1EG008258 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 12183047-12185046 Theobroma cacao
Thecc1EG008258 2.0kb downstream 2.0kb downstream 10191 true scaffold_2: 12172856-12183046 Theobroma cacao
Thecc1EG008258 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 12172856-12174855 Theobroma cacao
Thecc1EG008258 5.0kb upstream 5.0kb upstream 13191 true scaffold_2: 12174856-12188046 Theobroma cacao
Thecc1EG008258 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 12183047-12188046 Theobroma cacao
Thecc1EG008258 5.0kb downstream 5.0kb downstream 13191 true scaffold_2: 12169856-12183046 Theobroma cacao
Thecc1EG008258 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 12169856-12174855 Theobroma cacao
Thecc1EG008258 10.0kb upstream 10.0kb upstream 18191 true scaffold_2: 12174856-12193046 Theobroma cacao
Thecc1EG008258 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 12183047-12193046 Theobroma cacao
Thecc1EG008258 10.0kb downstream 10.0kb downstream 18191 true scaffold_2: 12164856-12183046 Theobroma cacao
Thecc1EG008258 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 12164856-12174855 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123835956 5264 Brassicales-Malvales View MSA
124340146 5266 SBM View MSA
124237991 5268 Malvidae View MSA
124066099 5270 Rosid View MSA
123753780 5271 Pentapetalae View MSA
122787775 5272 Eudicot View MSA
122044984 5273 Angiosperm View MSA
121345610 5274 Embryophyte View MSA
123428252 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain