Gene : Thecc1EG008223 T. cacao v1.1
Defline:  (1 of 9) PF05078 - Protein of unknown function (DUF679) (DUF679) Genomic Order:  1813
Name:  ? Thecc1EG008223 Secondary Identifier:  ? PAC:27460509
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG008223 0.5kb upstream 0.5kb upstream 1795 true scaffold_2: 11972394-11974188 Theobroma cacao
Thecc1EG008223 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 11973689-11974188 Theobroma cacao
Thecc1EG008223 0.5kb downstream 0.5kb downstream 1795 true scaffold_2: 11971894-11973688 Theobroma cacao
Thecc1EG008223 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 11971894-11972393 Theobroma cacao
Thecc1EG008223 1.0kb upstream 1.0kb upstream 2295 true scaffold_2: 11972394-11974688 Theobroma cacao
Thecc1EG008223 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 11973689-11974688 Theobroma cacao
Thecc1EG008223 1.0kb downstream 1.0kb downstream 2295 true scaffold_2: 11971394-11973688 Theobroma cacao
Thecc1EG008223 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 11971394-11972393 Theobroma cacao
Thecc1EG008223 2.0kb upstream 2.0kb upstream 3295 true scaffold_2: 11972394-11975688 Theobroma cacao
Thecc1EG008223 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 11973689-11975688 Theobroma cacao
Thecc1EG008223 2.0kb downstream 2.0kb downstream 3295 true scaffold_2: 11970394-11973688 Theobroma cacao
Thecc1EG008223 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 11970394-11972393 Theobroma cacao
Thecc1EG008223 5.0kb upstream 5.0kb upstream 6295 true scaffold_2: 11972394-11978688 Theobroma cacao
Thecc1EG008223 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 11973689-11978688 Theobroma cacao
Thecc1EG008223 5.0kb downstream 5.0kb downstream 6295 true scaffold_2: 11967394-11973688 Theobroma cacao
Thecc1EG008223 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 11967394-11972393 Theobroma cacao
Thecc1EG008223 10.0kb upstream 10.0kb upstream 11295 true scaffold_2: 11972394-11983688 Theobroma cacao
Thecc1EG008223 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 11973689-11983688 Theobroma cacao
Thecc1EG008223 10.0kb downstream 10.0kb downstream 11295 true scaffold_2: 11962394-11973688 Theobroma cacao
Thecc1EG008223 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 11962394-11972393 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123833035 5264 Brassicales-Malvales View MSA
124342743 5266 SBM View MSA
124237126 5268 Malvidae View MSA
124071441 5270 Rosid View MSA
123744074 5271 Pentapetalae View MSA
122789461 5272 Eudicot View MSA
122044570 5273 Angiosperm View MSA
121349168 5274 Embryophyte View MSA
123426818 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain