Gene : Thecc1EG008842 T. cacao v1.1
Defline:  (1 of 1) KOG4652 - HORMA domain Genomic Order:  2054
Name:  ? Thecc1EG008842 Secondary Identifier:  ? PAC:27463858
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG008842 0.5kb upstream 0.5kb upstream 7022 true scaffold_2: 17495297-17502318 Theobroma cacao
Thecc1EG008842 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 17501819-17502318 Theobroma cacao
Thecc1EG008842 0.5kb downstream 0.5kb downstream 7022 true scaffold_2: 17494797-17501818 Theobroma cacao
Thecc1EG008842 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 17494797-17495296 Theobroma cacao
Thecc1EG008842 1.0kb upstream 1.0kb upstream 7522 true scaffold_2: 17495297-17502818 Theobroma cacao
Thecc1EG008842 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 17501819-17502818 Theobroma cacao
Thecc1EG008842 1.0kb downstream 1.0kb downstream 7522 true scaffold_2: 17494297-17501818 Theobroma cacao
Thecc1EG008842 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 17494297-17495296 Theobroma cacao
Thecc1EG008842 2.0kb upstream 2.0kb upstream 8522 true scaffold_2: 17495297-17503818 Theobroma cacao
Thecc1EG008842 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 17501819-17503818 Theobroma cacao
Thecc1EG008842 2.0kb downstream 2.0kb downstream 8522 true scaffold_2: 17493297-17501818 Theobroma cacao
Thecc1EG008842 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 17493297-17495296 Theobroma cacao
Thecc1EG008842 5.0kb upstream 5.0kb upstream 11522 true scaffold_2: 17495297-17506818 Theobroma cacao
Thecc1EG008842 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 17501819-17506818 Theobroma cacao
Thecc1EG008842 5.0kb downstream 5.0kb downstream 11522 true scaffold_2: 17490297-17501818 Theobroma cacao
Thecc1EG008842 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 17490297-17495296 Theobroma cacao
Thecc1EG008842 10.0kb upstream 10.0kb upstream 16522 true scaffold_2: 17495297-17511818 Theobroma cacao
Thecc1EG008842 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 17501819-17511818 Theobroma cacao
Thecc1EG008842 10.0kb downstream 10.0kb downstream 16522 true scaffold_2: 17485297-17501818 Theobroma cacao
Thecc1EG008842 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 17485297-17495296 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041471 5273 Angiosperm View MSA
123830826 5264 Brassicales-Malvales View MSA
124338854 5266 SBM View MSA
124242492 5268 Malvidae View MSA
124067688 5270 Rosid View MSA
123740838 5271 Pentapetalae View MSA
122791726 5272 Eudicot View MSA
123429135 5275 Viridiplantae View MSA
121347816 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain