Gene : Thecc1EG008790 T. cacao v1.1
Defline:  Uncharacterized protein (51%P) Genomic Order:  2028
Name:  ? Thecc1EG008790 Secondary Identifier:  ? PAC:27460502
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG008790 0.5kb upstream 0.5kb upstream 6152 true scaffold_2: 17088181-17094332 Theobroma cacao
Thecc1EG008790 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 17088181-17088680 Theobroma cacao
Thecc1EG008790 0.5kb downstream 0.5kb downstream 6152 true scaffold_2: 17088681-17094832 Theobroma cacao
Thecc1EG008790 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 17094333-17094832 Theobroma cacao
Thecc1EG008790 1.0kb upstream 1.0kb upstream 6652 true scaffold_2: 17087681-17094332 Theobroma cacao
Thecc1EG008790 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 17087681-17088680 Theobroma cacao
Thecc1EG008790 1.0kb downstream 1.0kb downstream 6652 true scaffold_2: 17088681-17095332 Theobroma cacao
Thecc1EG008790 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 17094333-17095332 Theobroma cacao
Thecc1EG008790 2.0kb upstream 2.0kb upstream 7652 true scaffold_2: 17086681-17094332 Theobroma cacao
Thecc1EG008790 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 17086681-17088680 Theobroma cacao
Thecc1EG008790 2.0kb downstream 2.0kb downstream 7652 true scaffold_2: 17088681-17096332 Theobroma cacao
Thecc1EG008790 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 17094333-17096332 Theobroma cacao
Thecc1EG008790 5.0kb upstream 5.0kb upstream 10652 true scaffold_2: 17083681-17094332 Theobroma cacao
Thecc1EG008790 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 17083681-17088680 Theobroma cacao
Thecc1EG008790 5.0kb downstream 5.0kb downstream 10652 true scaffold_2: 17088681-17099332 Theobroma cacao
Thecc1EG008790 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 17094333-17099332 Theobroma cacao
Thecc1EG008790 10.0kb upstream 10.0kb upstream 15652 true scaffold_2: 17078681-17094332 Theobroma cacao
Thecc1EG008790 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 17078681-17088680 Theobroma cacao
Thecc1EG008790 10.0kb downstream 10.0kb downstream 15652 true scaffold_2: 17088681-17104332 Theobroma cacao
Thecc1EG008790 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 17094333-17104332 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123823911 5264 Brassicales-Malvales View MSA
124319964 5266 SBM View MSA
124252414 5268 Malvidae View MSA
124051495 5270 Rosid View MSA
123753554 5271 Pentapetalae View MSA
122797941 5272 Eudicot View MSA
122051690 5273 Angiosperm View MSA
121351675 5274 Embryophyte View MSA
123428354 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain