Gene : Thecc1EG008615 T. cacao v1.1

Defline:  Uncharacterized protein (68%P) Genomic Order:  1975
Name:  ? Thecc1EG008615 Secondary Identifier:  ? PAC:27460767

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG008615 0.5kb upstream 0.5kb upstream 4927 true scaffold_2: 15393196-15398122 Theobroma cacao
Thecc1EG008615 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 15393196-15393695 Theobroma cacao
Thecc1EG008615 0.5kb downstream 0.5kb downstream 4927 true scaffold_2: 15393696-15398622 Theobroma cacao
Thecc1EG008615 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 15398123-15398622 Theobroma cacao
Thecc1EG008615 1.0kb upstream 1.0kb upstream 5427 true scaffold_2: 15392696-15398122 Theobroma cacao
Thecc1EG008615 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 15392696-15393695 Theobroma cacao
Thecc1EG008615 1.0kb downstream 1.0kb downstream 5427 true scaffold_2: 15393696-15399122 Theobroma cacao
Thecc1EG008615 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 15398123-15399122 Theobroma cacao
Thecc1EG008615 2.0kb upstream 2.0kb upstream 6427 true scaffold_2: 15391696-15398122 Theobroma cacao
Thecc1EG008615 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 15391696-15393695 Theobroma cacao
Thecc1EG008615 2.0kb downstream 2.0kb downstream 6427 true scaffold_2: 15393696-15400122 Theobroma cacao
Thecc1EG008615 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 15398123-15400122 Theobroma cacao
Thecc1EG008615 5.0kb upstream 5.0kb upstream 9427 true scaffold_2: 15388696-15398122 Theobroma cacao
Thecc1EG008615 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 15388696-15393695 Theobroma cacao
Thecc1EG008615 5.0kb downstream 5.0kb downstream 9427 true scaffold_2: 15393696-15403122 Theobroma cacao
Thecc1EG008615 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 15398123-15403122 Theobroma cacao
Thecc1EG008615 10.0kb upstream 10.0kb upstream 14427 true scaffold_2: 15383696-15398122 Theobroma cacao
Thecc1EG008615 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 15383696-15393695 Theobroma cacao
Thecc1EG008615 10.0kb downstream 10.0kb downstream 14427 true scaffold_2: 15393696-15408122 Theobroma cacao
Thecc1EG008615 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 15398123-15408122 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040977 5273 Angiosperm View MSA
123839729 5264 Brassicales-Malvales View MSA
124349318 5266 SBM View MSA
124252020 5268 Malvidae View MSA
124070978 5270 Rosid View MSA
123741365 5271 Pentapetalae View MSA
122790161 5272 Eudicot View MSA
121309780 5274 Embryophyte View MSA
123347441 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain