Gene : Thecc1EG008423 T. cacao v1.1
Defline:  (1 of 1) PTHR31969//PTHR31969:SF3 - FAMILY NOT NAMED // GEM-LIKE PROTEIN 5 Genomic Order:  1912
Name:  ? Thecc1EG008423 Secondary Identifier:  ? PAC:27462118
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG008423 0.5kb upstream 0.5kb upstream 2461 true scaffold_2: 13493103-13495563 Theobroma cacao
Thecc1EG008423 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 13493103-13493602 Theobroma cacao
Thecc1EG008423 0.5kb downstream 0.5kb downstream 2461 true scaffold_2: 13493603-13496063 Theobroma cacao
Thecc1EG008423 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 13495564-13496063 Theobroma cacao
Thecc1EG008423 1.0kb upstream 1.0kb upstream 2961 true scaffold_2: 13492603-13495563 Theobroma cacao
Thecc1EG008423 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 13492603-13493602 Theobroma cacao
Thecc1EG008423 1.0kb downstream 1.0kb downstream 2961 true scaffold_2: 13493603-13496563 Theobroma cacao
Thecc1EG008423 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 13495564-13496563 Theobroma cacao
Thecc1EG008423 2.0kb upstream 2.0kb upstream 3961 true scaffold_2: 13491603-13495563 Theobroma cacao
Thecc1EG008423 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 13491603-13493602 Theobroma cacao
Thecc1EG008423 2.0kb downstream 2.0kb downstream 3961 true scaffold_2: 13493603-13497563 Theobroma cacao
Thecc1EG008423 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 13495564-13497563 Theobroma cacao
Thecc1EG008423 5.0kb upstream 5.0kb upstream 6961 true scaffold_2: 13488603-13495563 Theobroma cacao
Thecc1EG008423 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 13488603-13493602 Theobroma cacao
Thecc1EG008423 5.0kb downstream 5.0kb downstream 6961 true scaffold_2: 13493603-13500563 Theobroma cacao
Thecc1EG008423 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 13495564-13500563 Theobroma cacao
Thecc1EG008423 10.0kb upstream 10.0kb upstream 11961 true scaffold_2: 13483603-13495563 Theobroma cacao
Thecc1EG008423 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 13483603-13493602 Theobroma cacao
Thecc1EG008423 10.0kb downstream 10.0kb downstream 11961 true scaffold_2: 13493603-13505563 Theobroma cacao
Thecc1EG008423 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 13495564-13505563 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123841533 5264 Brassicales-Malvales View MSA
124346554 5266 SBM View MSA
124248271 5268 Malvidae View MSA
124071100 5270 Rosid View MSA
123744777 5271 Pentapetalae View MSA
122797412 5272 Eudicot View MSA
122050342 5273 Angiosperm View MSA
121350470 5274 Embryophyte View MSA
123381748 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain