Gene : Thecc1EG008421 T. cacao v1.1
Defline:  (1 of 3) PTHR31373//PTHR31373:SF0 - FAMILY NOT NAMED // EMB|CAB86628.1 Genomic Order:  1910
Name:  ? Thecc1EG008421 Secondary Identifier:  ? PAC:27464255
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG008421 0.5kb upstream 0.5kb upstream 3478 true scaffold_2: 13456878-13460355 Theobroma cacao
Thecc1EG008421 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 13459856-13460355 Theobroma cacao
Thecc1EG008421 0.5kb downstream 0.5kb downstream 3478 true scaffold_2: 13456378-13459855 Theobroma cacao
Thecc1EG008421 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 13456378-13456877 Theobroma cacao
Thecc1EG008421 1.0kb upstream 1.0kb upstream 3978 true scaffold_2: 13456878-13460855 Theobroma cacao
Thecc1EG008421 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 13459856-13460855 Theobroma cacao
Thecc1EG008421 1.0kb downstream 1.0kb downstream 3978 true scaffold_2: 13455878-13459855 Theobroma cacao
Thecc1EG008421 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 13455878-13456877 Theobroma cacao
Thecc1EG008421 2.0kb upstream 2.0kb upstream 4978 true scaffold_2: 13456878-13461855 Theobroma cacao
Thecc1EG008421 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 13459856-13461855 Theobroma cacao
Thecc1EG008421 2.0kb downstream 2.0kb downstream 4978 true scaffold_2: 13454878-13459855 Theobroma cacao
Thecc1EG008421 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 13454878-13456877 Theobroma cacao
Thecc1EG008421 5.0kb upstream 5.0kb upstream 7978 true scaffold_2: 13456878-13464855 Theobroma cacao
Thecc1EG008421 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 13459856-13464855 Theobroma cacao
Thecc1EG008421 5.0kb downstream 5.0kb downstream 7978 true scaffold_2: 13451878-13459855 Theobroma cacao
Thecc1EG008421 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 13451878-13456877 Theobroma cacao
Thecc1EG008421 10.0kb upstream 10.0kb upstream 12978 true scaffold_2: 13456878-13469855 Theobroma cacao
Thecc1EG008421 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 13459856-13469855 Theobroma cacao
Thecc1EG008421 10.0kb downstream 10.0kb downstream 12978 true scaffold_2: 13446878-13459855 Theobroma cacao
Thecc1EG008421 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 13446878-13456877 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041452 5273 Angiosperm View MSA
123838898 5264 Brassicales-Malvales View MSA
124349372 5266 SBM View MSA
124244202 5268 Malvidae View MSA
124064904 5270 Rosid View MSA
123749450 5271 Pentapetalae View MSA
122797220 5272 Eudicot View MSA
121346363 5274 Embryophyte View MSA
123428550 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain