Gene : Thecc1EG008389 T. cacao v1.1
Defline:  (1 of 9) PF05699//PF14372 - hAT family C-terminal dimerisation region (Dimer_Tnp_hAT) // Domain of unknown function (DUF4413) (DUF4413) Genomic Order:  1896
Name:  ? Thecc1EG008389 Secondary Identifier:  ? PAC:27462805
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG008389 0.5kb upstream 0.5kb upstream 5683 true scaffold_2: 13136347-13142029 Theobroma cacao
Thecc1EG008389 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 13141530-13142029 Theobroma cacao
Thecc1EG008389 0.5kb downstream 0.5kb downstream 5683 true scaffold_2: 13135847-13141529 Theobroma cacao
Thecc1EG008389 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 13135847-13136346 Theobroma cacao
Thecc1EG008389 1.0kb upstream 1.0kb upstream 6183 true scaffold_2: 13136347-13142529 Theobroma cacao
Thecc1EG008389 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 13141530-13142529 Theobroma cacao
Thecc1EG008389 1.0kb downstream 1.0kb downstream 6183 true scaffold_2: 13135347-13141529 Theobroma cacao
Thecc1EG008389 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 13135347-13136346 Theobroma cacao
Thecc1EG008389 2.0kb upstream 2.0kb upstream 7183 true scaffold_2: 13136347-13143529 Theobroma cacao
Thecc1EG008389 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 13141530-13143529 Theobroma cacao
Thecc1EG008389 2.0kb downstream 2.0kb downstream 7183 true scaffold_2: 13134347-13141529 Theobroma cacao
Thecc1EG008389 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 13134347-13136346 Theobroma cacao
Thecc1EG008389 5.0kb upstream 5.0kb upstream 10183 true scaffold_2: 13136347-13146529 Theobroma cacao
Thecc1EG008389 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 13141530-13146529 Theobroma cacao
Thecc1EG008389 5.0kb downstream 5.0kb downstream 10183 true scaffold_2: 13131347-13141529 Theobroma cacao
Thecc1EG008389 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 13131347-13136346 Theobroma cacao
Thecc1EG008389 10.0kb upstream 10.0kb upstream 15183 true scaffold_2: 13136347-13151529 Theobroma cacao
Thecc1EG008389 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 13141530-13151529 Theobroma cacao
Thecc1EG008389 10.0kb downstream 10.0kb downstream 15183 true scaffold_2: 13126347-13141529 Theobroma cacao
Thecc1EG008389 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 13126347-13136346 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123838595 5264 Brassicales-Malvales View MSA
124322480 5266 SBM View MSA
124250145 5268 Malvidae View MSA
124071055 5270 Rosid View MSA
123752994 5271 Pentapetalae View MSA
122797909 5272 Eudicot View MSA
122048190 5273 Angiosperm View MSA
121350578 5274 Embryophyte View MSA
123381805 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain