Gene : Thecc1EG009437 T. cacao v1.1

Defline:  (1 of 19) K05387 - glutamate receptor, ionotropic, plant (GRIP) Genomic Order:  2191
Name:  ? Thecc1EG009437 Secondary Identifier:  ? PAC:27463237

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG009437 0.5kb upstream 0.5kb upstream 9965 true scaffold_2: 23875545-23885509 Theobroma cacao
Thecc1EG009437 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 23875545-23876044 Theobroma cacao
Thecc1EG009437 0.5kb downstream 0.5kb downstream 9965 true scaffold_2: 23876045-23886009 Theobroma cacao
Thecc1EG009437 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 23885510-23886009 Theobroma cacao
Thecc1EG009437 1.0kb upstream 1.0kb upstream 10465 true scaffold_2: 23875045-23885509 Theobroma cacao
Thecc1EG009437 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 23875045-23876044 Theobroma cacao
Thecc1EG009437 1.0kb downstream 1.0kb downstream 10465 true scaffold_2: 23876045-23886509 Theobroma cacao
Thecc1EG009437 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 23885510-23886509 Theobroma cacao
Thecc1EG009437 2.0kb upstream 2.0kb upstream 11465 true scaffold_2: 23874045-23885509 Theobroma cacao
Thecc1EG009437 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 23874045-23876044 Theobroma cacao
Thecc1EG009437 2.0kb downstream 2.0kb downstream 11465 true scaffold_2: 23876045-23887509 Theobroma cacao
Thecc1EG009437 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 23885510-23887509 Theobroma cacao
Thecc1EG009437 5.0kb upstream 5.0kb upstream 14465 true scaffold_2: 23871045-23885509 Theobroma cacao
Thecc1EG009437 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 23871045-23876044 Theobroma cacao
Thecc1EG009437 5.0kb downstream 5.0kb downstream 14465 true scaffold_2: 23876045-23890509 Theobroma cacao
Thecc1EG009437 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 23885510-23890509 Theobroma cacao
Thecc1EG009437 10.0kb upstream 10.0kb upstream 19465 true scaffold_2: 23866045-23885509 Theobroma cacao
Thecc1EG009437 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 23866045-23876044 Theobroma cacao
Thecc1EG009437 10.0kb downstream 10.0kb downstream 19465 true scaffold_2: 23876045-23895509 Theobroma cacao
Thecc1EG009437 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 23885510-23895509 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123817543 5264 Brassicales-Malvales Singleton cluster - no MSA
124347451 5266 SBM View MSA
124254993 5268 Malvidae View MSA
124071317 5270 Rosid View MSA
123753015 5271 Pentapetalae View MSA
122797408 5272 Eudicot View MSA
122051662 5273 Angiosperm View MSA
121351346 5274 Embryophyte View MSA
123428796 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain