Gene : Thecc1EG009387 T. cacao v1.1
Defline:  (1 of 1) PTHR26402//PTHR26402:SF593 - RESPONSE REGULATOR OF TWO-COMPONENT SYSTEM // SUBFAMILY NOT NAMED Genomic Order:  2176
Name:  ? Thecc1EG009387 Secondary Identifier:  ? PAC:27460695
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG009387 0.5kb upstream 0.5kb upstream 5495 true scaffold_2: 23454747-23460241 Theobroma cacao
Thecc1EG009387 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 23459742-23460241 Theobroma cacao
Thecc1EG009387 0.5kb downstream 0.5kb downstream 5495 true scaffold_2: 23454247-23459741 Theobroma cacao
Thecc1EG009387 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 23454247-23454746 Theobroma cacao
Thecc1EG009387 1.0kb upstream 1.0kb upstream 5995 true scaffold_2: 23454747-23460741 Theobroma cacao
Thecc1EG009387 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 23459742-23460741 Theobroma cacao
Thecc1EG009387 1.0kb downstream 1.0kb downstream 5995 true scaffold_2: 23453747-23459741 Theobroma cacao
Thecc1EG009387 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 23453747-23454746 Theobroma cacao
Thecc1EG009387 2.0kb upstream 2.0kb upstream 6995 true scaffold_2: 23454747-23461741 Theobroma cacao
Thecc1EG009387 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 23459742-23461741 Theobroma cacao
Thecc1EG009387 2.0kb downstream 2.0kb downstream 6995 true scaffold_2: 23452747-23459741 Theobroma cacao
Thecc1EG009387 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 23452747-23454746 Theobroma cacao
Thecc1EG009387 5.0kb upstream 5.0kb upstream 9995 true scaffold_2: 23454747-23464741 Theobroma cacao
Thecc1EG009387 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 23459742-23464741 Theobroma cacao
Thecc1EG009387 5.0kb downstream 5.0kb downstream 9995 true scaffold_2: 23449747-23459741 Theobroma cacao
Thecc1EG009387 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 23449747-23454746 Theobroma cacao
Thecc1EG009387 10.0kb upstream 10.0kb upstream 14995 true scaffold_2: 23454747-23469741 Theobroma cacao
Thecc1EG009387 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 23459742-23469741 Theobroma cacao
Thecc1EG009387 10.0kb downstream 10.0kb downstream 14995 true scaffold_2: 23444747-23459741 Theobroma cacao
Thecc1EG009387 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 23444747-23454746 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123817075 5264 Brassicales-Malvales Singleton cluster - no MSA
124313446 5266 SBM Singleton cluster - no MSA
124162538 5268 Malvidae Singleton cluster - no MSA
123886432 5270 Rosid Singleton cluster - no MSA
123752744 5271 Pentapetalae View MSA
122797364 5272 Eudicot View MSA
122048998 5273 Angiosperm View MSA
123428935 5275 Viridiplantae View MSA
121350891 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain