Gene : Thecc1EG009199 T. cacao v1.1
Defline:  (1 of 2) K16282 - E3 ubiquitin-protein ligase RHA2 [EC:6.3.2.19] (RHA2) Genomic Order:  2151
Name:  ? Thecc1EG009199 Secondary Identifier:  ? PAC:27462584
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG009199 0.5kb upstream 0.5kb upstream 1642 true scaffold_2: 21390132-21391773 Theobroma cacao
Thecc1EG009199 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 21390132-21390631 Theobroma cacao
Thecc1EG009199 0.5kb downstream 0.5kb downstream 1642 true scaffold_2: 21390632-21392273 Theobroma cacao
Thecc1EG009199 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 21391774-21392273 Theobroma cacao
Thecc1EG009199 1.0kb upstream 1.0kb upstream 2142 true scaffold_2: 21389632-21391773 Theobroma cacao
Thecc1EG009199 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 21389632-21390631 Theobroma cacao
Thecc1EG009199 1.0kb downstream 1.0kb downstream 2142 true scaffold_2: 21390632-21392773 Theobroma cacao
Thecc1EG009199 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 21391774-21392773 Theobroma cacao
Thecc1EG009199 2.0kb upstream 2.0kb upstream 3142 true scaffold_2: 21388632-21391773 Theobroma cacao
Thecc1EG009199 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 21388632-21390631 Theobroma cacao
Thecc1EG009199 2.0kb downstream 2.0kb downstream 3142 true scaffold_2: 21390632-21393773 Theobroma cacao
Thecc1EG009199 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 21391774-21393773 Theobroma cacao
Thecc1EG009199 5.0kb upstream 5.0kb upstream 6142 true scaffold_2: 21385632-21391773 Theobroma cacao
Thecc1EG009199 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 21385632-21390631 Theobroma cacao
Thecc1EG009199 5.0kb downstream 5.0kb downstream 6142 true scaffold_2: 21390632-21396773 Theobroma cacao
Thecc1EG009199 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 21391774-21396773 Theobroma cacao
Thecc1EG009199 10.0kb upstream 10.0kb upstream 11142 true scaffold_2: 21380632-21391773 Theobroma cacao
Thecc1EG009199 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 21380632-21390631 Theobroma cacao
Thecc1EG009199 10.0kb downstream 10.0kb downstream 11142 true scaffold_2: 21390632-21401773 Theobroma cacao
Thecc1EG009199 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 21391774-21401773 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123827818 5264 Brassicales-Malvales View MSA
124343152 5266 SBM View MSA
124251223 5268 Malvidae View MSA
124069970 5270 Rosid View MSA
123750154 5271 Pentapetalae View MSA
122792700 5272 Eudicot View MSA
122051603 5273 Angiosperm View MSA
123429130 5275 Viridiplantae View MSA
121351603 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain