Gene : Thecc1EG009035 T. cacao v1.1
Defline:  (1 of 2) PTHR15492//PTHR15492:SF1 - FAMILY NOT NAMED // CYCLIN-D1-BINDING PROTEIN 1 Genomic Order:  2125
Name:  ? Thecc1EG009035 Secondary Identifier:  ? PAC:27463295
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG009035 0.5kb upstream 0.5kb upstream 1859 true scaffold_2: 19307138-19308996 Theobroma cacao
Thecc1EG009035 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 19307138-19307637 Theobroma cacao
Thecc1EG009035 0.5kb downstream 0.5kb downstream 1859 true scaffold_2: 19307638-19309496 Theobroma cacao
Thecc1EG009035 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 19308997-19309496 Theobroma cacao
Thecc1EG009035 1.0kb upstream 1.0kb upstream 2359 true scaffold_2: 19306638-19308996 Theobroma cacao
Thecc1EG009035 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 19306638-19307637 Theobroma cacao
Thecc1EG009035 1.0kb downstream 1.0kb downstream 2359 true scaffold_2: 19307638-19309996 Theobroma cacao
Thecc1EG009035 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 19308997-19309996 Theobroma cacao
Thecc1EG009035 2.0kb upstream 2.0kb upstream 3359 true scaffold_2: 19305638-19308996 Theobroma cacao
Thecc1EG009035 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 19305638-19307637 Theobroma cacao
Thecc1EG009035 2.0kb downstream 2.0kb downstream 3359 true scaffold_2: 19307638-19310996 Theobroma cacao
Thecc1EG009035 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 19308997-19310996 Theobroma cacao
Thecc1EG009035 5.0kb upstream 5.0kb upstream 6359 true scaffold_2: 19302638-19308996 Theobroma cacao
Thecc1EG009035 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 19302638-19307637 Theobroma cacao
Thecc1EG009035 5.0kb downstream 5.0kb downstream 6359 true scaffold_2: 19307638-19313996 Theobroma cacao
Thecc1EG009035 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 19308997-19313996 Theobroma cacao
Thecc1EG009035 10.0kb upstream 10.0kb upstream 11359 true scaffold_2: 19297638-19308996 Theobroma cacao
Thecc1EG009035 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 19297638-19307637 Theobroma cacao
Thecc1EG009035 10.0kb downstream 10.0kb downstream 11359 true scaffold_2: 19307638-19318996 Theobroma cacao
Thecc1EG009035 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 19308997-19318996 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121781959 5273 Angiosperm View MSA
123817550 5264 Brassicales-Malvales Singleton cluster - no MSA
124313896 5266 SBM Singleton cluster - no MSA
124249420 5268 Malvidae View MSA
123952366 5270 Rosid View MSA
123751420 5271 Pentapetalae View MSA
122774011 5272 Eudicot View MSA
121053510 5274 Embryophyte View MSA
123093529 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain