Gene : Thecc1EG008907 T. cacao v1.1
Defline:  (1 of 1) K14308 - nuclear pore complex protein Nup54 (NUP54, NUP57) Genomic Order:  2086
Name:  ? Thecc1EG008907 Secondary Identifier:  ? PAC:27461901
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG008907 0.5kb upstream 0.5kb upstream 4523 true scaffold_2: 18110832-18115354 Theobroma cacao
Thecc1EG008907 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 18110832-18111331 Theobroma cacao
Thecc1EG008907 0.5kb downstream 0.5kb downstream 4523 true scaffold_2: 18111332-18115854 Theobroma cacao
Thecc1EG008907 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 18115355-18115854 Theobroma cacao
Thecc1EG008907 1.0kb upstream 1.0kb upstream 5023 true scaffold_2: 18110332-18115354 Theobroma cacao
Thecc1EG008907 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 18110332-18111331 Theobroma cacao
Thecc1EG008907 1.0kb downstream 1.0kb downstream 5023 true scaffold_2: 18111332-18116354 Theobroma cacao
Thecc1EG008907 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 18115355-18116354 Theobroma cacao
Thecc1EG008907 2.0kb upstream 2.0kb upstream 6023 true scaffold_2: 18109332-18115354 Theobroma cacao
Thecc1EG008907 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 18109332-18111331 Theobroma cacao
Thecc1EG008907 2.0kb downstream 2.0kb downstream 6023 true scaffold_2: 18111332-18117354 Theobroma cacao
Thecc1EG008907 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 18115355-18117354 Theobroma cacao
Thecc1EG008907 5.0kb upstream 5.0kb upstream 9023 true scaffold_2: 18106332-18115354 Theobroma cacao
Thecc1EG008907 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 18106332-18111331 Theobroma cacao
Thecc1EG008907 5.0kb downstream 5.0kb downstream 9023 true scaffold_2: 18111332-18120354 Theobroma cacao
Thecc1EG008907 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 18115355-18120354 Theobroma cacao
Thecc1EG008907 10.0kb upstream 10.0kb upstream 14023 true scaffold_2: 18101332-18115354 Theobroma cacao
Thecc1EG008907 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 18101332-18111331 Theobroma cacao
Thecc1EG008907 10.0kb downstream 10.0kb downstream 14023 true scaffold_2: 18111332-18125354 Theobroma cacao
Thecc1EG008907 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 18115355-18125354 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123838749 5264 Brassicales-Malvales View MSA
124344607 5266 SBM View MSA
124247731 5268 Malvidae View MSA
124068868 5270 Rosid View MSA
123740833 5271 Pentapetalae View MSA
122795867 5272 Eudicot View MSA
122045094 5273 Angiosperm View MSA
121347023 5274 Embryophyte View MSA
123424455 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain