Gene : Thecc1EG010131 T. cacao v1.1
Defline:  (1 of 1) PTHR11516//PTHR11516:SF38//PTHR11516:SF40 - PYRUVATE DEHYDROGENASE E1 COMPONENT, ALPHA SUBUNIT BACTERIAL AND ORGANELLAR // SUBFAMILY NOT NAMED // PDHA1 PROTEIN Genomic Order:  2383
Name:  ? Thecc1EG010131 Secondary Identifier:  ? PAC:27460215
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-5173 Theobroma cacao pathologic  
Tcacao PWY-5464 Theobroma cacao pathologic  
Tcacao PYRUVDEHYD-PWY Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG010131 0.5kb upstream 0.5kb upstream 11464 true scaffold_2: 30968669-30980132 Theobroma cacao
Thecc1EG010131 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 30968669-30969168 Theobroma cacao
Thecc1EG010131 0.5kb downstream 0.5kb downstream 11464 true scaffold_2: 30969169-30980632 Theobroma cacao
Thecc1EG010131 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 30980133-30980632 Theobroma cacao
Thecc1EG010131 1.0kb upstream 1.0kb upstream 11964 true scaffold_2: 30968169-30980132 Theobroma cacao
Thecc1EG010131 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 30968169-30969168 Theobroma cacao
Thecc1EG010131 1.0kb downstream 1.0kb downstream 11964 true scaffold_2: 30969169-30981132 Theobroma cacao
Thecc1EG010131 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 30980133-30981132 Theobroma cacao
Thecc1EG010131 2.0kb upstream 2.0kb upstream 12964 true scaffold_2: 30967169-30980132 Theobroma cacao
Thecc1EG010131 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 30967169-30969168 Theobroma cacao
Thecc1EG010131 2.0kb downstream 2.0kb downstream 12964 true scaffold_2: 30969169-30982132 Theobroma cacao
Thecc1EG010131 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 30980133-30982132 Theobroma cacao
Thecc1EG010131 5.0kb upstream 5.0kb upstream 15964 true scaffold_2: 30964169-30980132 Theobroma cacao
Thecc1EG010131 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 30964169-30969168 Theobroma cacao
Thecc1EG010131 5.0kb downstream 5.0kb downstream 15964 true scaffold_2: 30969169-30985132 Theobroma cacao
Thecc1EG010131 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 30980133-30985132 Theobroma cacao
Thecc1EG010131 10.0kb upstream 10.0kb upstream 20964 true scaffold_2: 30959169-30980132 Theobroma cacao
Thecc1EG010131 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 30959169-30969168 Theobroma cacao
Thecc1EG010131 10.0kb downstream 10.0kb downstream 20964 true scaffold_2: 30969169-30990132 Theobroma cacao
Thecc1EG010131 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 30980133-30990132 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123838646 5264 Brassicales-Malvales View MSA
124346461 5266 SBM View MSA
124239887 5268 Malvidae View MSA
124066466 5270 Rosid View MSA
123744027 5271 Pentapetalae View MSA
122788942 5272 Eudicot View MSA
122045712 5273 Angiosperm View MSA
121344698 5274 Embryophyte View MSA
123425832 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain