Gene : Thecc1EG010109 T. cacao v1.1
Defline:  (1 of 6) PF00560//PF07714//PF08263 - Leucine Rich Repeat (LRR_1) // Protein tyrosine kinase (Pkinase_Tyr) // Leucine rich repeat N-terminal domain (LRRNT_2) Genomic Order:  2370
Name:  ? Thecc1EG010109 Secondary Identifier:  ? PAC:27461222
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG010109 0.5kb upstream 0.5kb upstream 4302 true scaffold_2: 30812163-30816464 Theobroma cacao
Thecc1EG010109 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 30815965-30816464 Theobroma cacao
Thecc1EG010109 0.5kb downstream 0.5kb downstream 4302 true scaffold_2: 30811663-30815964 Theobroma cacao
Thecc1EG010109 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 30811663-30812162 Theobroma cacao
Thecc1EG010109 1.0kb upstream 1.0kb upstream 4802 true scaffold_2: 30812163-30816964 Theobroma cacao
Thecc1EG010109 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 30815965-30816964 Theobroma cacao
Thecc1EG010109 1.0kb downstream 1.0kb downstream 4802 true scaffold_2: 30811163-30815964 Theobroma cacao
Thecc1EG010109 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 30811163-30812162 Theobroma cacao
Thecc1EG010109 2.0kb upstream 2.0kb upstream 5802 true scaffold_2: 30812163-30817964 Theobroma cacao
Thecc1EG010109 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 30815965-30817964 Theobroma cacao
Thecc1EG010109 2.0kb downstream 2.0kb downstream 5802 true scaffold_2: 30810163-30815964 Theobroma cacao
Thecc1EG010109 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 30810163-30812162 Theobroma cacao
Thecc1EG010109 5.0kb upstream 5.0kb upstream 8802 true scaffold_2: 30812163-30820964 Theobroma cacao
Thecc1EG010109 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 30815965-30820964 Theobroma cacao
Thecc1EG010109 5.0kb downstream 5.0kb downstream 8802 true scaffold_2: 30807163-30815964 Theobroma cacao
Thecc1EG010109 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 30807163-30812162 Theobroma cacao
Thecc1EG010109 10.0kb upstream 10.0kb upstream 13802 true scaffold_2: 30812163-30825964 Theobroma cacao
Thecc1EG010109 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 30815965-30825964 Theobroma cacao
Thecc1EG010109 10.0kb downstream 10.0kb downstream 13802 true scaffold_2: 30802163-30815964 Theobroma cacao
Thecc1EG010109 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 30802163-30812162 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123834545 5264 Brassicales-Malvales View MSA
124343267 5266 SBM View MSA
124238301 5268 Malvidae View MSA
124071838 5270 Rosid View MSA
123750976 5271 Pentapetalae View MSA
122795298 5272 Eudicot View MSA
122046399 5273 Angiosperm View MSA
121346190 5274 Embryophyte View MSA
123380345 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain