Gene : Thecc1EG010090 T. cacao v1.1
Defline:  (1 of 2) K01934 - 5-formyltetrahydrofolate cyclo-ligase (MTHFS) Genomic Order:  2365
Name:  ? Thecc1EG010090 Secondary Identifier:  ? PAC:27459936
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-3841 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG010090 0.5kb upstream 0.5kb upstream 4008 true scaffold_2: 30595585-30599592 Theobroma cacao
Thecc1EG010090 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 30599093-30599592 Theobroma cacao
Thecc1EG010090 0.5kb downstream 0.5kb downstream 4008 true scaffold_2: 30595085-30599092 Theobroma cacao
Thecc1EG010090 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 30595085-30595584 Theobroma cacao
Thecc1EG010090 1.0kb upstream 1.0kb upstream 4508 true scaffold_2: 30595585-30600092 Theobroma cacao
Thecc1EG010090 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 30599093-30600092 Theobroma cacao
Thecc1EG010090 1.0kb downstream 1.0kb downstream 4508 true scaffold_2: 30594585-30599092 Theobroma cacao
Thecc1EG010090 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 30594585-30595584 Theobroma cacao
Thecc1EG010090 2.0kb upstream 2.0kb upstream 5508 true scaffold_2: 30595585-30601092 Theobroma cacao
Thecc1EG010090 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 30599093-30601092 Theobroma cacao
Thecc1EG010090 2.0kb downstream 2.0kb downstream 5508 true scaffold_2: 30593585-30599092 Theobroma cacao
Thecc1EG010090 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 30593585-30595584 Theobroma cacao
Thecc1EG010090 5.0kb upstream 5.0kb upstream 8508 true scaffold_2: 30595585-30604092 Theobroma cacao
Thecc1EG010090 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 30599093-30604092 Theobroma cacao
Thecc1EG010090 5.0kb downstream 5.0kb downstream 8508 true scaffold_2: 30590585-30599092 Theobroma cacao
Thecc1EG010090 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 30590585-30595584 Theobroma cacao
Thecc1EG010090 10.0kb upstream 10.0kb upstream 13508 true scaffold_2: 30595585-30609092 Theobroma cacao
Thecc1EG010090 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 30599093-30609092 Theobroma cacao
Thecc1EG010090 10.0kb downstream 10.0kb downstream 13508 true scaffold_2: 30585585-30599092 Theobroma cacao
Thecc1EG010090 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 30585585-30595584 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041034 5273 Angiosperm View MSA
123835860 5264 Brassicales-Malvales View MSA
124349517 5266 SBM View MSA
124246872 5268 Malvidae View MSA
124060507 5270 Rosid View MSA
123750943 5271 Pentapetalae View MSA
122792422 5272 Eudicot View MSA
121347096 5274 Embryophyte View MSA
123424141 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain