Gene : Thecc1EG010028 T. cacao v1.1
Defline:  (1 of 1) PTHR31205:SF2 - ACTIN CROSS-LINKING PROTEIN Genomic Order:  2339
Name:  ? Thecc1EG010028 Secondary Identifier:  ? PAC:27460525
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG010028 0.5kb upstream 0.5kb upstream 7681 true scaffold_2: 30108251-30115931 Theobroma cacao
Thecc1EG010028 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 30115432-30115931 Theobroma cacao
Thecc1EG010028 0.5kb downstream 0.5kb downstream 7681 true scaffold_2: 30107751-30115431 Theobroma cacao
Thecc1EG010028 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 30107751-30108250 Theobroma cacao
Thecc1EG010028 1.0kb upstream 1.0kb upstream 8181 true scaffold_2: 30108251-30116431 Theobroma cacao
Thecc1EG010028 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 30115432-30116431 Theobroma cacao
Thecc1EG010028 1.0kb downstream 1.0kb downstream 8181 true scaffold_2: 30107251-30115431 Theobroma cacao
Thecc1EG010028 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 30107251-30108250 Theobroma cacao
Thecc1EG010028 2.0kb upstream 2.0kb upstream 9181 true scaffold_2: 30108251-30117431 Theobroma cacao
Thecc1EG010028 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 30115432-30117431 Theobroma cacao
Thecc1EG010028 2.0kb downstream 2.0kb downstream 9181 true scaffold_2: 30106251-30115431 Theobroma cacao
Thecc1EG010028 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 30106251-30108250 Theobroma cacao
Thecc1EG010028 5.0kb upstream 5.0kb upstream 12181 true scaffold_2: 30108251-30120431 Theobroma cacao
Thecc1EG010028 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 30115432-30120431 Theobroma cacao
Thecc1EG010028 5.0kb downstream 5.0kb downstream 12181 true scaffold_2: 30103251-30115431 Theobroma cacao
Thecc1EG010028 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 30103251-30108250 Theobroma cacao
Thecc1EG010028 10.0kb upstream 10.0kb upstream 17181 true scaffold_2: 30108251-30125431 Theobroma cacao
Thecc1EG010028 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 30115432-30125431 Theobroma cacao
Thecc1EG010028 10.0kb downstream 10.0kb downstream 17181 true scaffold_2: 30098251-30115431 Theobroma cacao
Thecc1EG010028 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 30098251-30108250 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123831929 5264 Brassicales-Malvales View MSA
124337924 5266 SBM View MSA
124249792 5268 Malvidae View MSA
124067257 5270 Rosid View MSA
123752337 5271 Pentapetalae View MSA
122792795 5272 Eudicot View MSA
122046577 5273 Angiosperm View MSA
121350939 5274 Embryophyte View MSA
123381941 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain