Gene : Thecc1EG009634 T. cacao v1.1
Defline:  Copper-binding periplasmic protein (60%P) Genomic Order:  2244
Name:  ? Thecc1EG009634 Secondary Identifier:  ? PAC:27461502
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG009634 0.5kb upstream 0.5kb upstream 3485 true scaffold_2: 25977281-25980765 Theobroma cacao
Thecc1EG009634 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 25980266-25980765 Theobroma cacao
Thecc1EG009634 0.5kb downstream 0.5kb downstream 3485 true scaffold_2: 25976781-25980265 Theobroma cacao
Thecc1EG009634 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 25976781-25977280 Theobroma cacao
Thecc1EG009634 1.0kb upstream 1.0kb upstream 3985 true scaffold_2: 25977281-25981265 Theobroma cacao
Thecc1EG009634 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 25980266-25981265 Theobroma cacao
Thecc1EG009634 1.0kb downstream 1.0kb downstream 3985 true scaffold_2: 25976281-25980265 Theobroma cacao
Thecc1EG009634 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 25976281-25977280 Theobroma cacao
Thecc1EG009634 2.0kb upstream 2.0kb upstream 4985 true scaffold_2: 25977281-25982265 Theobroma cacao
Thecc1EG009634 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 25980266-25982265 Theobroma cacao
Thecc1EG009634 2.0kb downstream 2.0kb downstream 4985 true scaffold_2: 25975281-25980265 Theobroma cacao
Thecc1EG009634 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 25975281-25977280 Theobroma cacao
Thecc1EG009634 5.0kb upstream 5.0kb upstream 7985 true scaffold_2: 25977281-25985265 Theobroma cacao
Thecc1EG009634 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 25980266-25985265 Theobroma cacao
Thecc1EG009634 5.0kb downstream 5.0kb downstream 7985 true scaffold_2: 25972281-25980265 Theobroma cacao
Thecc1EG009634 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 25972281-25977280 Theobroma cacao
Thecc1EG009634 10.0kb upstream 10.0kb upstream 12985 true scaffold_2: 25977281-25990265 Theobroma cacao
Thecc1EG009634 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 25980266-25990265 Theobroma cacao
Thecc1EG009634 10.0kb downstream 10.0kb downstream 12985 true scaffold_2: 25967281-25980265 Theobroma cacao
Thecc1EG009634 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 25967281-25977280 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123828211 5264 Brassicales-Malvales View MSA
124338924 5266 SBM View MSA
124245037 5268 Malvidae View MSA
124065676 5270 Rosid View MSA
123746732 5271 Pentapetalae View MSA
122786820 5272 Eudicot View MSA
122047207 5273 Angiosperm View MSA
121310707 5274 Embryophyte View MSA
123348126 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain