Gene : Thecc1EG009581 T. cacao v1.1
Defline:  (1 of 14) PTHR27009//PTHR27009:SF21 - FAMILY NOT NAMED // PR5-LIKE RECEPTOR KINASE-RELATED Genomic Order:  2228
Name:  ? Thecc1EG009581 Secondary Identifier:  ? PAC:27463574
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-7409 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG009581 0.5kb upstream 0.5kb upstream 6945 true scaffold_2: 25566885-25573829 Theobroma cacao
Thecc1EG009581 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 25566885-25567384 Theobroma cacao
Thecc1EG009581 0.5kb downstream 0.5kb downstream 6945 true scaffold_2: 25567385-25574329 Theobroma cacao
Thecc1EG009581 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 25573830-25574329 Theobroma cacao
Thecc1EG009581 1.0kb upstream 1.0kb upstream 7445 true scaffold_2: 25566385-25573829 Theobroma cacao
Thecc1EG009581 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 25566385-25567384 Theobroma cacao
Thecc1EG009581 1.0kb downstream 1.0kb downstream 7445 true scaffold_2: 25567385-25574829 Theobroma cacao
Thecc1EG009581 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 25573830-25574829 Theobroma cacao
Thecc1EG009581 2.0kb upstream 2.0kb upstream 8445 true scaffold_2: 25565385-25573829 Theobroma cacao
Thecc1EG009581 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 25565385-25567384 Theobroma cacao
Thecc1EG009581 2.0kb downstream 2.0kb downstream 8445 true scaffold_2: 25567385-25575829 Theobroma cacao
Thecc1EG009581 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 25573830-25575829 Theobroma cacao
Thecc1EG009581 5.0kb upstream 5.0kb upstream 11445 true scaffold_2: 25562385-25573829 Theobroma cacao
Thecc1EG009581 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 25562385-25567384 Theobroma cacao
Thecc1EG009581 5.0kb downstream 5.0kb downstream 11445 true scaffold_2: 25567385-25578829 Theobroma cacao
Thecc1EG009581 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 25573830-25578829 Theobroma cacao
Thecc1EG009581 10.0kb upstream 10.0kb upstream 16445 true scaffold_2: 25557385-25573829 Theobroma cacao
Thecc1EG009581 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 25557385-25567384 Theobroma cacao
Thecc1EG009581 10.0kb downstream 10.0kb downstream 16445 true scaffold_2: 25567385-25583829 Theobroma cacao
Thecc1EG009581 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 25573830-25583829 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123841309 5264 Brassicales-Malvales View MSA
124347184 5266 SBM View MSA
124254633 5268 Malvidae View MSA
124074937 5270 Rosid View MSA
123753765 5271 Pentapetalae View MSA
122797900 5272 Eudicot View MSA
122051692 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain