Gene : Thecc1EG010347 T. cacao v1.1
Defline:  (1 of 1) PTHR31458//PTHR31458:SF3 - FAMILY NOT NAMED // POLYGALACTURONASE NON-CATALYTIC SUBUNIT JP630-RELATED Genomic Order:  2497
Name:  ? Thecc1EG010347 Secondary Identifier:  ? PAC:27462338
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG010347 0.5kb upstream 0.5kb upstream 8097 true scaffold_2: 32809703-32817799 Theobroma cacao
Thecc1EG010347 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 32817300-32817799 Theobroma cacao
Thecc1EG010347 0.5kb downstream 0.5kb downstream 8097 true scaffold_2: 32809203-32817299 Theobroma cacao
Thecc1EG010347 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 32809203-32809702 Theobroma cacao
Thecc1EG010347 1.0kb upstream 1.0kb upstream 8597 true scaffold_2: 32809703-32818299 Theobroma cacao
Thecc1EG010347 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 32817300-32818299 Theobroma cacao
Thecc1EG010347 1.0kb downstream 1.0kb downstream 8597 true scaffold_2: 32808703-32817299 Theobroma cacao
Thecc1EG010347 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 32808703-32809702 Theobroma cacao
Thecc1EG010347 2.0kb upstream 2.0kb upstream 9597 true scaffold_2: 32809703-32819299 Theobroma cacao
Thecc1EG010347 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 32817300-32819299 Theobroma cacao
Thecc1EG010347 2.0kb downstream 2.0kb downstream 9597 true scaffold_2: 32807703-32817299 Theobroma cacao
Thecc1EG010347 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 32807703-32809702 Theobroma cacao
Thecc1EG010347 5.0kb upstream 5.0kb upstream 12597 true scaffold_2: 32809703-32822299 Theobroma cacao
Thecc1EG010347 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 32817300-32822299 Theobroma cacao
Thecc1EG010347 5.0kb downstream 5.0kb downstream 12597 true scaffold_2: 32804703-32817299 Theobroma cacao
Thecc1EG010347 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 32804703-32809702 Theobroma cacao
Thecc1EG010347 10.0kb upstream 10.0kb upstream 17597 true scaffold_2: 32809703-32827299 Theobroma cacao
Thecc1EG010347 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 32817300-32827299 Theobroma cacao
Thecc1EG010347 10.0kb downstream 10.0kb downstream 17597 true scaffold_2: 32799703-32817299 Theobroma cacao
Thecc1EG010347 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 32799703-32809702 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123832587 5264 Brassicales-Malvales View MSA
124343319 5266 SBM View MSA
124238820 5268 Malvidae View MSA
124060515 5270 Rosid View MSA
123747690 5271 Pentapetalae View MSA
122795038 5272 Eudicot View MSA
122050223 5273 Angiosperm View MSA
121351029 5274 Embryophyte View MSA
123381981 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain