Gene : Thecc1EG010246 T. cacao v1.1
Defline:  (1 of 2) PTHR23315//PTHR23315:SF116 - BETA CATENIN-RELATED ARMADILLO REPEAT-CONTAINING // U-BOX DOMAIN-CONTAINING PROTEIN 18-RELATED Genomic Order:  2437
Name:  ? Thecc1EG010246 Secondary Identifier:  ? PAC:27461386
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-7511 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG010246 0.5kb upstream 0.5kb upstream 3505 true scaffold_2: 31906226-31909730 Theobroma cacao
Thecc1EG010246 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 31909231-31909730 Theobroma cacao
Thecc1EG010246 0.5kb downstream 0.5kb downstream 3505 true scaffold_2: 31905726-31909230 Theobroma cacao
Thecc1EG010246 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 31905726-31906225 Theobroma cacao
Thecc1EG010246 1.0kb upstream 1.0kb upstream 4005 true scaffold_2: 31906226-31910230 Theobroma cacao
Thecc1EG010246 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 31909231-31910230 Theobroma cacao
Thecc1EG010246 1.0kb downstream 1.0kb downstream 4005 true scaffold_2: 31905226-31909230 Theobroma cacao
Thecc1EG010246 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 31905226-31906225 Theobroma cacao
Thecc1EG010246 2.0kb upstream 2.0kb upstream 5005 true scaffold_2: 31906226-31911230 Theobroma cacao
Thecc1EG010246 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 31909231-31911230 Theobroma cacao
Thecc1EG010246 2.0kb downstream 2.0kb downstream 5005 true scaffold_2: 31904226-31909230 Theobroma cacao
Thecc1EG010246 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 31904226-31906225 Theobroma cacao
Thecc1EG010246 5.0kb upstream 5.0kb upstream 8005 true scaffold_2: 31906226-31914230 Theobroma cacao
Thecc1EG010246 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 31909231-31914230 Theobroma cacao
Thecc1EG010246 5.0kb downstream 5.0kb downstream 8005 true scaffold_2: 31901226-31909230 Theobroma cacao
Thecc1EG010246 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 31901226-31906225 Theobroma cacao
Thecc1EG010246 10.0kb upstream 10.0kb upstream 13005 true scaffold_2: 31906226-31919230 Theobroma cacao
Thecc1EG010246 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 31909231-31919230 Theobroma cacao
Thecc1EG010246 10.0kb downstream 10.0kb downstream 13005 true scaffold_2: 31896226-31909230 Theobroma cacao
Thecc1EG010246 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 31896226-31906225 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123836521 5264 Brassicales-Malvales View MSA
124341451 5266 SBM View MSA
124245770 5268 Malvidae View MSA
124069612 5270 Rosid View MSA
123741587 5271 Pentapetalae View MSA
122786622 5272 Eudicot View MSA
122046188 5273 Angiosperm View MSA
121310571 5274 Embryophyte View MSA
123428864 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain